RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TRIM44Q96DX7 344 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 APOPT1Q96IL0 206 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 TSPAN32Q96QS1 320 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 PANX1Q96RD7 426 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 EMC6Q9BV81 110 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 BCL2L14Q9BZR8 327 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 MMP27Q9H306 513 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 C1orf198Q9H425 327 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 SAP30LQ9HAJ7 183 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 P2RX2Q9UBL9 471 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 PURGQ9UJV8 347 aaKnown RBP11.39□□□□□ -0.59
COL1A1-209ENST00000495677 GPR45Q9Y5Y3 372 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 AUP1Q9Y679 476 aa11.39□□□□□ -0.59
COL1A1-209ENST00000495677 A0A0G2JPF8 293 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 HNRNPCL2B2RXH8 293 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 HNRNPCL3B7ZW38 293 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 HNRNPCL1O60812 293 aaKnown RBP11.38□□□□□ -0.59
COL1A1-209ENST00000495677 UBOX5O94941 541 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 MFN2O95140 757 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 KRT75O95678 551 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 PTHP01270 115 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 MT-ND5P03915 603 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 ADH4P08319 380 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 HNRNPCL4P0DMR1 293 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 HLA-DOBP13765 273 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF12P17014 697 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 MVDP53602 400 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 UCP2P55851 309 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 PDCD4Q53EL6 469 aaKnown RBP11.38□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF621Q6ZSS3 439 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 DPPA2Q7Z7J5 298 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 SCAIQ8N9R8 606 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 SLC30A7Q8NEW0 376 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 FGFBP3Q8TAT2 258 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 TXNDC15Q96J42 360 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 CITED1Q99966 193 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-209ENST00000495677 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 MMP26Q9NRE1 261 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 SLC17A7Q9P2U7 560 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 INSIG2Q9Y5U4 225 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 CACNG2Q9Y698 323 aa11.38□□□□□ -0.59
COL1A1-209ENST00000495677 TRAV36DV7A0A075B6V5 113 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 A0A087WUJ7 227 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF726A6NNF4 738 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 TRAPPC2LH3BP13 241 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 HPRP00739 348 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 MTNR1AP48039 350 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 RBBP4Q09028 425 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 FBLN7Q53RD9 439 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 CARD17Q5XLA6 110 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 PXKQ7Z7A4 578 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 SLC22A24Q8N4F4 322 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 CPEB3Q8NE35 698 aaKnown RBP11.37□□□□□ -0.59
COL1A1-209ENST00000495677 OR1J2Q8NGS2 313 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 OR6N1Q8NGY5 312 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 SLC38A5Q8WUX1 472 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 DNAJA4Q8WW22 397 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-209ENST00000495677 CCL17Q92583 94 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
COL1A1-209ENST00000495677 THUMPD1Q9NXG2 353 aaKnown RBP11.37□□□□□ -0.59
COL1A1-209ENST00000495677 PDP1Q9P0J1 537 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-209ENST00000495677 IGKV1D-42A0A075B6H8 117 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 A8MXK9 166 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TM9SF1O15321 606 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TPD52L2O43399 206 aaKnown RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 MGRN1O60291 552 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 IGHMP01871 453 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 LCKP06239 509 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 PATE4P0C8F1 98 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 LIPAP38571 399 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 CDKN2CP42773 168 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF81P51508 661 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 MMP15P51511 669 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 ERVS71-1P61550 626 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 PAX8Q06710 450 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 C1orf174Q8IYL3 243 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 PAQR4Q8N4S7 273 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TCP10LQ8TDR4 215 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 EPS8L3Q8TE67 593 aaKnown RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TMEM54Q969K7 222 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TEX37Q96LM6 180 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 MS4A7Q9GZW8 240 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 CDH20Q9HBT6 801 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 MRPL39Q9NYK5 338 aaKnown RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 KLHL14Q9P2G3 628 aa11.36□□□□□ -0.59
COL1A1-209ENST00000495677 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-209ENST00000495677 TIMM23O14925 209 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-209ENST00000495677 KNG1P01042 644 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 BGLAPP02818 100 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 BCHEP06276 602 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms