RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 NOXO1Q8NFA2 376 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 OR10G2Q8NGC3 310 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 MUS81Q96NY9 551 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 GPA33Q99795 319 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 ARMC1Q9NVT9 282 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 GLTPQ9NZD2 209 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
TRA2A-209ENST00000494255 MGAT4BQ9UQ53 548 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 POFUT2Q9Y2G5 429 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF99A8MXY4 864 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 XKRYO14609 159 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 TRMUO75648 421 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 THBDP07204 575 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 FCGR1AP12314 374 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 GSTM3P21266 225 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 SLC6A6P31641 620 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ACVR1BP36896 505 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ARF1P84077 181 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 KPNB1Q14974 876 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 PHYHD1Q5SRE7 291 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 GPR139Q6DWJ6 353 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF770Q6IQ21 691 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 RPL13AP3Q6NVV1 102 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ANKRD16Q6P6B7 361 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 DPY19L2P2Q6ZN68 376 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 TMEM200AQ86VY9 491 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 WDFY1Q8IWB7 410 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ARIH2OSQ8N7S6 290 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 SYT14Q8NB59 555 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 OR52L1Q8NGH7 329 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 OR52N5Q8NH56 324 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 DUS3LQ96G46 650 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF570Q96NI8 536 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 TSPAN32Q96QS1 320 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 GPX7Q96SL4 187 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 OR52D1Q9H346 318 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 SLC17A5Q9NRA2 495 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 PDP1Q9P0J1 537 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ARRDC5A6NEK1 342 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ENTPD5O75356 428 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 WNT11O96014 354 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 GASTP01350 101 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 QDPRP09417 244 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 FASP25445 335 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 RPS6KA3P51812 740 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 IST1P53990 364 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 UBE2NP61088 152 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ACTR3P61158 418 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 RUNX1T1Q06455 604 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 CD47Q08722 323 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ATP6AP1Q15904 470 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 BEX5Q5H9J7 111 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 FNDC8Q8TC99 324 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 GTPBP3Q969Y2 492 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ALG12Q9BV10 488 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 DGCR6LQ9BY27 220 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 IL20RAQ9UHF4 553 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ADAM18Q9Y3Q7 739 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 MAGED1Q9Y5V3 778 aaPredicted RBP10.95□□□□□ -0.66
TRA2A-209ENST00000494255 CDH10Q9Y6N8 788 aa10.95□□□□□ -0.66
TRA2A-209ENST00000494255 ANKHD1Q8IWZ3 2542 aaKnown RBP10.94□□□□□ -0.66
TRA2A-209ENST00000494255 DHHO43323 396 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 CTAG2O75638 210 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 PRF1P14222 555 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
TRA2A-209ENST00000494255 SDHAP31040 664 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF84P51523 738 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 FXYD6P3P58550 94 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZSCAN26Q16670 478 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 RFX4Q33E94 735 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 TBRG1Q3YBR2 411 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 HIKESHIQ53FT3 197 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF620Q6ZNG0 422 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 RASSF6Q6ZTQ3 369 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF519Q8TB69 540 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
TRA2A-209ENST00000494255 HDAC2Q92769 488 aaKnown RBP10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
TRA2A-209ENST00000494255 PIK3IP1Q96FE7 263 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 BOD1Q96IK1 185 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 SAMD8Q96LT4 415 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 Q96M85 177 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 RBP7Q96R05 134 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 FEVQ99581 238 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 FOXB1Q99853 325 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 BDH2Q9BUT1 245 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 IFT27Q9BW83 186 aa10.94□□□□□ -0.66
TRA2A-209ENST00000494255 ZNF556Q9HAH1 456 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms