RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NANSQ9NR45 359 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 ABCA1O95477 2261 aa11.58□□□□□ -0.55
CTDSP1-212ENST00000494067 TRAPPC13A5PLN9 417 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 VWC2LB2RUY7 222 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 RNF13O43567 381 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 FARS2O95363 451 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 HLA-HP01893 362 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 DAOP14920 347 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 FUT4P22083 530 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 PCGF2P35227 344 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 PTDSS1P48651 473 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 BIDP55957 195 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 RPS23P62266 143 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 PIGFQ07326 219 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 MMEL1Q495T6 779 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 UGT2A3Q6UWM9 527 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 CALHM3Q86XJ0 350 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 DOK1Q99704 481 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 REPIN1Q9BWE0 567 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 MS4A5Q9H3V2 200 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF446Q9NWS9 450 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 B3GNT2Q9NY97 397 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 GMPR2Q9P2T1 348 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 SLC7A7Q9UM01 511 aa11.58□□□□□ -0.56
CTDSP1-212ENST00000494067 JMJD1CQ15652 2540 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 TMEM129A0AVI4 362 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 STAMBPO95630 424 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 CH25HO95992 272 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 IFNA14P01570 189 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 IFNGR1P15260 489 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 B4GALT1P15291 398 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF23P17027 643 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 SRD5A1P18405 259 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 NR4A1P22736 598 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 EVX1P49640 407 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 CHN2P52757 468 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 SELENOVP59797 346 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 RAB1AP62820 205 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZP4Q12836 540 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF74Q16587 644 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 REP15Q6BDI9 236 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 NANOGP8Q6NSW7 305 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 SLC35D2Q76EJ3 337 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF627Q7L945 461 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZCCHC24Q8N2G6 241 aaKnown RBP11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 OR6X1Q8NH79 312 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 UBASH3BQ8TF42 649 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF566Q969W8 418 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ECSITQ9BQ95 431 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF426Q9BUY5 554 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 SLC19A3Q9BZV2 496 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 CHODLQ9H9P2 273 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 NANOGQ9H9S0 305 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 MEPEQ9NQ76 525 aaPredicted RBP11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 TAS2R5Q9NYW4 299 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 GLTPQ9NZD2 209 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF229Q9UJW7 825 aa11.57□□□□□ -0.56
CTDSP1-212ENST00000494067 SLC22A23A1A5C7 686 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 M0R233 179 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 KPNA4O00629 521 aaPredicted RBP11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 SHOX2O60902 331 aaPredicted RBP11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 BCL10O95999 233 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 TGFAP01135 160 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 ADRA2AP08913 450 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 OR8G3PP0DMU2 310 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 TROVE2P10155 538 aaKnown RBP eCLIP11.56□□□□□ -0.563e-6■□□□□ 9.2
CTDSP1-212ENST00000494067 GLRXP35754 106 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 GIPRP48546 466 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 MELKQ14680 651 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 MAPRE2Q15555 327 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 VMACQ2NL98 169 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 HDDC2Q7Z4H3 204 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 DPPA2Q7Z7J5 298 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF786Q8N393 782 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 MRPL24Q96A35 216 aaKnown RBP11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 SLC25A44Q96H78 314 aaPredicted RBP11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 SOX7Q9BT81 388 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 PCDHAC1Q9H158 963 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 RNF121Q9H920 327 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 REV1Q9UBZ9 1251 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 GPR160Q9UJ42 338 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 BAG5Q9UL15 447 aa11.56□□□□□ -0.56
CTDSP1-212ENST00000494067 IGHV4-61A0A0C4DH41 118 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 A0A1W2PRG6 482 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 MCIDASD6RGH6 385 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 BLOC1S5-TXNDC5H3BN57 136 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 SYNGR3O43761 229 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 NPPAP01160 153 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 PTHP01270 115 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 IGHG1P01857 330 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 PATE4P0C8F1 98 aa11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 ZNF14P17017 642 aaPredicted RBP11.55□□□□□ -0.56
CTDSP1-212ENST00000494067 IFNA8P32881 189 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms