RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GLCEO94923 617 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 IL5P05113 134 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 STAG3L3P0CL85 134 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GZMBP10144 247 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MTHFD2P13995 350 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ITPKBP27987 946 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 IGFALSP35858 605 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 RPL4P36578 427 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CASRP41180 1078 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MTNR1AP48039 350 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MTNR1BP49286 362 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SLC16A1P53985 500 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SOX8P57073 446 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 KLF3P57682 345 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ST8SIA6P61647 398 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SHC2P98077 582 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 NHLH1Q02575 133 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 RPE65Q16518 533 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3GQ6DHY5 549 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GRHL2Q6ISB3 625 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SLC22A25Q6T423 547 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ENPP7Q6UWV6 458 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF813Q6ZN06 617 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 NDUFAF7Q7L592 441 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CALHM3Q86XJ0 350 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SELENOHQ8IZQ5 122 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF433Q8N7K0 673 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 AMER3Q8N944 861 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 HJURPQ8NCD3 748 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OR52N4Q8NGI2 321 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 DCUN1D4Q92564 292 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 AARSD1Q9BTE6 412 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 RNF39Q9H2S5 420 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SLC2A9Q9NRM0 540 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CACFD1Q9UGQ2 172 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 NOTCH4Q99466 2003 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 C13orf42A0A1B0GVH6 325 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1W2PN81 502 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 IRGMA1A4Y4 181 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 C5orf51A6NDU8 294 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 DRGXA6NNA5 263 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 VSTM5A8MXK1 200 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 PTGESO14684 152 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SOD2P04179 222 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GALTP07902 379 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OSMP13725 252 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 NID1P14543 1247 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CHRNA7P36544 502 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 IFNGR2P38484 337 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CHRFAM7AQ494W8 412 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 FBXO47Q5MNV8 452 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MED27Q6P2C8 311 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 C5orf24Q7Z6I8 188 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CTU1Q7Z7A3 348 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SYT9Q86SS6 491 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ADIPOR2Q86V24 386 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CPOQ8IVL8 374 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 LAS2Q8IYD9 372 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MMP21Q8N119 569 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SIDT2Q8NBJ9 832 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OR5M8Q8NGP6 311 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OR13C4Q8NGS5 318 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OR8S1Q8NH09 359 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 FAM216AQ8WUB2 273 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GPR87Q9BY21 358 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 PCTPQ9UKL6 214 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CBLCQ9ULV8 474 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CAMK2AQ9UQM7 478 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SPTBN5Q9NRC6 3674 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CDC14BO60729 498 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ADAP1O75689 374 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 KCNK5O95279 499 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 VSIG10L2P0DP72 767 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 LIPCP11150 499 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 PSEN2P49810 448 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GEMP55040 296 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 UBE2G2P60604 165 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 S100A10P60903 97 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 WDR5P61964 334 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SNRPGP62308 76 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 IQCJQ1A5X6 159 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 XKR6Q5GH73 641 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 C11orf87Q6NUJ2 197 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CMTM1Q8IZ96 169 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 LRRC52Q8N7C0 313 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 KLHDC9Q8NEP7 349 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 OR4D9Q8NGE8 314 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 GPR150Q8NGU9 434 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 SH3RF2Q8TEC5 729 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 CLEC4CQ8WTT0 213 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 DYRK2Q92630 601 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 VOPP1Q96AW1 172 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 DNAJA3Q96EY1 480 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 COLEC11Q9BWP8 271 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 MFRPQ9BY79 579 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms