RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 IFNA2P01563 188 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 IFNA14P01570 189 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 NR4A2P43354 598 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 PTDSS1P48651 473 aaKnown RBP17.79■□□□□ 0.44
CLTA-208ENST00000493185 TAS2R41P59536 307 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 GGTLC2Q14390 218 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 NANOGNBQ7Z5D8 188 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 SVOPLQ8N434 492 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 LRRC17Q8N6Y2 441 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 PCYOX1LQ8NBM8 494 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 TMEM54Q969K7 222 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 MS4A3Q96HJ5 214 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 MDFIQ99750 246 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 DYNLRB1Q9NP97 96 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 SAR1AQ9NR31 198 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 GID8Q9NWU2 228 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 GLTPQ9NZD2 209 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 FBXL3Q9UKT7 428 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 CMAHPQ9Y471 501 aa17.79■□□□□ 0.44
CLTA-208ENST00000493185 ANK3Q12955 4377 aaKnown RBP17.79■□□□□ 0.44
CLTA-208ENST00000493185 VWC2LB2RUY7 222 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 ASAH2BP0C7U1 165 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 ZNF14P17017 642 aaPredicted RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 NR4A1P22736 598 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 GZMKP49863 264 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 SF3A3Q12874 501 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLTA-208ENST00000493185 PIWIL3Q7Z3Z3 882 aaKnown RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 ZNF540Q8NDQ6 660 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 NEU4Q8WWR8 484 aaPredicted RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 SLC25A44Q96H78 314 aaPredicted RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 FOXN4Q96NZ1 517 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 KCNK17Q96T54 332 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 DOK1Q99704 481 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 PRSS27Q9BQR3 290 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 POLR2J2Q9GZM3 115 aaKnown RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 POLR2J3Q9H1A7 115 aaKnown RBP17.78■□□□□ 0.44
CLTA-208ENST00000493185 CDC42EP3Q9UKI2 254 aa17.78■□□□□ 0.44
CLTA-208ENST00000493185 BLOC1S5-TXNDC5H3BN57 136 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 BCL10O95999 233 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 IGHV4-31P0DP07 118 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 RBM34P42696 430 aaKnown RBP17.77■□□□□ 0.44
CLTA-208ENST00000493185 GIPRP48546 466 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 RAB1AP62820 205 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 MELKQ14680 651 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 IQCCQ4KMZ1 466 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 PODNL1Q6PEZ8 512 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 DEF8Q6ZN54 512 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 MEPEQ9NQ76 525 aaPredicted RBP17.77■□□□□ 0.44
CLTA-208ENST00000493185 ZNF224Q9NZL3 707 aa17.77■□□□□ 0.44
CLTA-208ENST00000493185 ATRQ13535 2644 aa17.77■□□□□ 0.43
CLTA-208ENST00000493185 LOC100653049A0A140TA62 436 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 TMEM129A0AVI4 362 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 SH3PXD2BA1X283 911 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 KRT34O76011 436 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 OR5F1O95221 314 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 IGHG1P01857 330 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 MT-ND1P03886 318 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 OR8G3PP0DMU2 310 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 ZNF35P13682 527 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 ZNF16P17020 682 aaPredicted RBP17.76■□□□□ 0.43
CLTA-208ENST00000493185 TNFRSF1BP20333 461 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 LSP1P33241 339 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 GALK2Q01415 458 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 GKAP1Q5VSY0 366 aaPredicted RBP17.76■□□□□ 0.43
CLTA-208ENST00000493185 SLC22A24Q8N4F4 322 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 C10orf82Q8WW14 230 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 ZNF75AQ96N20 296 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 ZNF583Q96ND8 569 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 TMEM160Q9NX00 188 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 RIMS3Q9UJD0 308 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 CAPN7Q9Y6W3 813 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 MALRD1Q5VYJ5 2156 aa17.76■□□□□ 0.43
CLTA-208ENST00000493185 A0A1W2PRG6 482 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 FAM220BPB1ANY3 271 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 MCIDASD6RGH6 385 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 DHHO43323 396 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 SHOX2O60902 331 aaPredicted RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 FARS2O95363 451 aaKnown RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 PGA4P0DJD7 388 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 PGA3P0DJD8 388 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 APEHP13798 732 aaKnown RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 DAOP14920 347 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 CLRN1P58418 232 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 RPS23P62266 143 aaKnown RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 RPL18Q07020 188 aaKnown RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 CGB2Q6NT52 195 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 HDDC2Q7Z4H3 204 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 NKAIN4Q8IVV8 208 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 SKA3Q8IX90 412 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 CDK20Q8IZL9 346 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 TMEM239Q8WW34 195 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 MRPL24Q96A35 216 aaKnown RBP17.75■□□□□ 0.43
CLTA-208ENST00000493185 SGTBQ96EQ0 304 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 TMEM38BQ9NVV0 291 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 LPAR3Q9UBY5 353 aa17.75■□□□□ 0.43
CLTA-208ENST00000493185 IGHV4-61A0A0C4DH41 118 aa17.74■□□□□ 0.43
CLTA-208ENST00000493185 OR7A10O76100 309 aa17.74■□□□□ 0.43
CLTA-208ENST00000493185 IGF2P01344 180 aa17.74■□□□□ 0.43
CLTA-208ENST00000493185 ADRA2AP08913 450 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms