RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 JMJD8Q96S16 334 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 SH3GL3Q99963 347 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 SUCNR1Q9BXA5 334 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 PAIP1Q9H074 479 aaKnown RBP11.67□□□□□ -0.54
SAMM50-204ENST00000493161 SLC52A3Q9NQ40 469 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 SLC7A8Q9UHI5 535 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 OPN4Q9UHM6 478 aa11.67□□□□□ -0.54
SAMM50-204ENST00000493161 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
SAMM50-204ENST00000493161 IGLV3-9A0A075B6K5 115 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 A0A0X1KG70 313 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 TMEM247A6NEH6 219 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 ZNF726A6NNF4 738 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 C11orf98E9PRG8 122 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 TM9SF1O15321 606 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 HDAC3O15379 428 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 IDO1P14902 403 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 PRKAR1BP31321 381 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 CRYBB2P43320 205 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 LIMS1P48059 325 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 CSNK1A1P48729 337 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 BIDP55957 195 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 UBA52P62987 128 aaKnown RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 GLO1Q04760 184 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 PUDPQ08623 228 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 ULK3Q6PHR2 472 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 SLC2A7Q6PXP3 512 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 MAVSQ7Z434 540 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 SLC22A24Q8N4F4 322 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 SLC30A7Q8NEW0 376 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 OR4M2Q8NGB6 313 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 NFKBIDQ8NI38 313 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 ASPNQ9BXN1 380 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 DENND2DQ9H6A0 471 aaPredicted RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 SSU72Q9NP77 194 aaKnown RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
SAMM50-204ENST00000493161 WIPI2Q9Y4P8 454 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 CORINQ9Y5Q5 1042 aa11.66□□□□□ -0.54
SAMM50-204ENST00000493161 A0A0B4J2E0 115 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 IGHV1-69-2A0A0G2JMI3 117 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 A0A1B0GX12 115 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 CLIC1O00299 241 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 RGS16O15492 202 aaPredicted RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 BCL10O95999 233 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 FSHBP01225 129 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 BMP2P12643 396 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 ETS2P15036 469 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 ANPEPP15144 967 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 ZNF250P15622 560 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 POLR2JP52435 117 aaKnown RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 CDH12P55289 794 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 ZP4Q12836 540 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 OR1Q1Q15612 314 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 TMEM154Q6P9G4 183 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 USP51Q70EK9 711 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 PIWIL3Q7Z3Z3 882 aaKnown RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 PXKQ7Z7A4 578 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 MSRB3Q8IXL7 192 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 BPIFB2Q8N4F0 458 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 C10orf53Q8N6V4 93 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 SYNPRQ8TBG9 265 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 SLC47A1Q96FL8 570 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 DUX5Q96PT3 197 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 OR52B2Q96RD2 323 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 ZNF747Q9BV97 191 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 RMND5AQ9H871 391 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 SDR39U1Q9NRG7 319 aaPredicted RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 MRPL39Q9NYK5 338 aaKnown RBP11.65□□□□□ -0.54
SAMM50-204ENST00000493161 SLC25A37Q9NYZ2 338 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 SLAMF8Q9P0V8 285 aa11.65□□□□□ -0.54
SAMM50-204ENST00000493161 TRPC5OSA6NMA1 111 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 C5orf58C9J3I9 102 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 SNNO75324 88 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-204ENST00000493161 PRSS23O95084 383 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 LCKP06239 509 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 ARAFP10398 606 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 MAKP20794 623 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 LSP1P33241 339 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 RAD52P43351 418 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
SAMM50-204ENST00000493161 RBBP4Q09028 425 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 MELKQ14680 651 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 TSTQ16762 297 aaKnown RBP11.64□□□□□ -0.55
SAMM50-204ENST00000493161 FAM91A1Q658Y4 838 aa11.64□□□□□ -0.55
SAMM50-204ENST00000493161 MSANTD1Q6ZTZ1 278 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms