RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 OR8G3PP0DMU2 310 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 HLA-DOBP13765 273 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 KDELR2P33947 212 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 PTDSS1P48651 473 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 GZMKP49863 264 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 PPOXP50336 477 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 DAP3P51398 398 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 PLP2Q04941 152 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 ST3GAL3Q11203 375 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 TAF11Q15544 211 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 CHRFAM7AQ494W8 412 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 IQCCQ4KMZ1 466 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 TMEM53Q6P2H8 277 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 COMTD1Q86VU5 262 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 MICU2Q8IYU8 434 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 CDK20Q8IZL9 346 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 GPR32P1Q8NGA4 272 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 TXNDC15Q96J42 360 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 RSPO3Q9BXY4 272 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 MYLK2Q9H1R3 596 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 MS4A5Q9H3V2 200 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 C1orf198Q9H425 327 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 RNF121Q9H920 327 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 MED31Q9Y3C7 131 aa14.39□□□□□ -0.11
PDLIM2-217ENST00000491330 hCG_2039718K7EN88 272 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 GMNNO75496 209 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 DCTN3O75935 186 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 HPRP00739 348 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 HLA-HP01893 362 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 MT-ND1P03886 318 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 B4GALT1P15291 398 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 RAB1AP62820 205 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 LSM11P83369 360 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 PIGFQ07326 219 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 ADIPOQQ15848 244 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC36A2Q495M3 483 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 LRRC23Q53EV4 343 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 C8orf82Q6P1X6 216 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 PODNL1Q6PEZ8 512 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 UGT2A3Q6UWM9 527 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 UNQ6126/PRO20091Q6UXV3 157 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 RRM2BQ7LG56 351 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 OR1J2Q8NGS2 313 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 C10orf105Q8TEF2 133 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 SGTBQ96EQ0 304 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 TPD52L3Q96J77 140 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 ZNF426Q9BUY5 554 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 NDE1Q9NXR1 346 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 LPAR3Q9UBY5 353 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 RIMS3Q9UJD0 308 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 CDC42EP3Q9UKI2 254 aa14.38□□□□□ -0.11
PDLIM2-217ENST00000491330 IGHV2OR16-5A0A0B4J2B6 119 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 CENPBD1B2RD01 187 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 LRRN3E7EW58 273 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SEC14L2O76054 403 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 FUT1P19526 365 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 DRD4P21917 467 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SEC24CP53992 1094 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SELENOWP63302 87 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SNTB2Q13425 540 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 TMEM249Q2WGJ8 235 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SPATS1Q496A3 300 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 ZNF627Q7L945 461 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC15A3Q8IY34 581 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 FNDC8Q8TC99 324 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 TMEM239Q8WW34 195 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 HTRA1Q92743 480 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 INIPQ9NRY2 104 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 ABCD2Q9UBJ2 740 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 ARL2BPQ9Y2Y0 163 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
PDLIM2-217ENST00000491330 IQCMA0A1B0GVH7 501 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 DHHO43323 396 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 HNF1AP20823 631 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 NR4A1P22736 598 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 THBS4P35443 961 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 EVX1P49640 407 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 NUDT2P50583 147 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 MNAT1P51948 309 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 CRYBA2P53672 197 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 GNGT1P63211 74 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 VLDLRP98155 873 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 SF3A3Q12874 501 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 GGTLC2Q14390 218 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 MOGQ16653 247 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 MST1LQ2TV78 715 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 NRN1LQ496H8 165 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 CYBRD1Q53TN4 286 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 CYP4Z1Q86W10 505 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 RBM45Q8IUH3 476 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC22A24Q8N4F4 322 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 POU5F2Q8N7G0 328 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 TMEM54Q969K7 222 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 LRRC37BQ96QE4 947 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 BEX2Q9BXY8 128 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms