RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PIGFQ07326 219 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 RAB39AQ14964 217 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 NKPD1Q17RQ9 610 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 MIDNQ504T8 468 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 AVPI1Q5T686 147 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HIST2H2BDQ6DRA6 164 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 RGS7BPQ6MZT1 257 aaPredicted RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 TMEM154Q6P9G4 183 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 ZNF621Q6ZSS3 439 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 PIWIL3Q7Z3Z3 882 aaKnown RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 UEVLDQ8IX04 471 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 KIRREL3Q8IZU9 778 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 ZNF781Q8N8C0 355 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 LSMEM1Q8N8F7 131 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 SCAIQ8N9R8 606 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 SLC38A5Q8WUX1 472 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 PPP1R36Q96LQ0 422 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 C1orf147Q96MC9 270 aaPredicted RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 ULBP2Q9BZM5 246 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 C7orf69Q9H7B7 122 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 UNKLQ9H9P5 680 aaKnown RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 TCF7L2Q9NQB0 619 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 THUMPD1Q9NXG2 353 aaKnown RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 SLCO1C1Q9NYB5 712 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 TAAR3PQ9P1P4 343 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 KLHL14Q9P2G3 628 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HAO1Q9UJM8 370 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 FZR1Q9UM11 496 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 ZNF232Q9UNY5 417 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 POFUT2Q9Y2G5 429 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 RAP2CQ9Y3L5 183 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 WIPI2Q9Y4P8 454 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 PPIAL4AQ9Y536 164 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 A0A087WUJ7 227 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 CLDN34H7C241 214 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 ITM2AO43736 263 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 TYROBPO43914 113 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 CDC14BO60729 498 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 ENTPD5O75356 428 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SPAG7O75391 227 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SNAP29O95721 258 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 CLPTM1O96005 669 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 HPRP00739 348 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 RNASE1P07998 156 aaKnown RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 ALDOCP09972 364 aaKnown RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 HLA-DOBP13765 273 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 ETFAP13804 333 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 IL12AP29459 219 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 AQP5P55064 265 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 DSTNP60981 165 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 UFM1P61960 85 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 CAMK2DQ13557 499 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 FAM209AQ5JX71 171 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 CARD17Q5XLA6 110 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 RBMS3Q6XE24 437 aaKnown RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 WDFY1Q8IWB7 410 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SIGLECL1Q8N7X8 197 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 GLB1L3Q8NCI6 653 aaPredicted RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 ZNF519Q8TB69 540 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SYNPRQ8TBG9 265 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SNX33Q8WV41 574 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 DNAJA4Q8WW22 397 aaPredicted RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 C22orf15Q8WYQ4 148 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 RAB1CQ92928 201 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 POP5Q969H6 163 aaKnown RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 TIMD4Q96H15 378 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 TMEM19Q96HH6 336 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 TSPAN32Q96QS1 320 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 OR52E6Q96RD3 313 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 GPA33Q99795 319 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 RHOXF2Q9BQY4 288 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 EMC6Q9BV81 110 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 C1orf198Q9H425 327 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 MEAF6Q9HAF1 191 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 BCL2L10Q9HD36 194 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 SLC6A13Q9NSD5 602 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 AIG1Q9NVV5 245 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 PLEK2Q9NYT0 353 aa6.96□□□□□ -1.3
USP39-216ENST00000490193 POLR3KQ9Y2Y1 108 aaPredicted RBP6.96□□□□□ -1.3
USP39-216ENST00000490193 A0A1B0GWA3 101 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 TLDC2A0PJX2 215 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 RFXANKO14593 260 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 MFN2O95140 757 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 IGHV3-13P01766 116 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 BGLAPP02818 100 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SERPINE1P05121 402 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 ADH4P08319 380 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 NQO1P15559 274 aaKnown RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 HTR2AP28223 471 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 CRATP43155 626 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 RAD52P43351 418 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 RPL14P50914 215 aaKnown RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 ATP4BP51164 291 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 ABCE1P61221 599 aaKnown RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 HOXC5Q00444 222 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 PUDPQ08623 228 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 MOGQ16653 247 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms