RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FOXH1O75593 365 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 GLO1Q04760 184 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 ZNF154Q13106 437 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 LARS2Q15031 903 aaKnown RBP13.7□□□□□ -0.22
USP48-210ENST00000489108 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
USP48-210ENST00000489108 JAZF1Q86VZ6 243 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 TRIML2Q8N7C3 387 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 ELMOD3Q96FG2 381 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 CCT8L2Q96SF2 557 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 SPATA9Q9BWV2 254 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
USP48-210ENST00000489108 MMP24Q9Y5R2 645 aa13.7□□□□□ -0.22
USP48-210ENST00000489108 ZNF726A6NNF4 738 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 GPANK1O95872 356 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 KNG1P01042 644 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 OR8G3PP0DMU2 310 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 NQO1P15559 274 aaKnown RBP13.69□□□□□ -0.22
USP48-210ENST00000489108 SERPINB5P36952 375 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 CLNS1AP54105 237 aaKnown RBP13.69□□□□□ -0.22
USP48-210ENST00000489108 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
USP48-210ENST00000489108 C16orf87Q6PH81 154 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 SPATC1Q76KD6 591 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 SNX32Q86XE0 403 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 KIR3DL3Q8N743 410 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 ICA1LQ8NDH6 482 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 SLC38A4Q969I6 547 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 TEX37Q96LM6 180 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 MS4A7Q9GZW8 240 aaPredicted RBP13.69□□□□□ -0.22
USP48-210ENST00000489108 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 P2RX2Q9UBL9 471 aa13.69□□□□□ -0.22
USP48-210ENST00000489108 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 A0A087WUJ7 227 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 E9PBE3 544 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 SPRY3O43610 288 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 SPAG7O75391 227 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 BCHEP06276 602 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 ETFAP13804 333 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 DRD4P21917 467 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 ZNF81P51508 661 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 UCP2P55851 309 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 NME5P56597 212 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 HNRNPA0Q13151 305 aaKnown RBP13.68□□□□□ -0.22
USP48-210ENST00000489108 MOGQ16653 247 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 DPY19L1Q2PZI1 675 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 C6orf89Q6UWU4 347 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
USP48-210ENST00000489108 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 ADPRHL1Q8NDY3 354 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 WFDC12Q8WWY7 111 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
USP48-210ENST00000489108 ZIM3Q96PE6 472 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 SH3GL3Q99963 347 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 MMP27Q9H306 513 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 ARMC7Q9H6L4 198 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 MKS1Q9NXB0 559 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 CALML5Q9NZT1 146 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 TESQ9UGI8 421 aaKnown RBP13.68□□□□□ -0.22
USP48-210ENST00000489108 INSIG2Q9Y5U4 225 aa13.68□□□□□ -0.22
USP48-210ENST00000489108 IGHV3OR16-10A0A075B7F0 116 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 UBOX5O94941 541 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 IGHV1-46P01743 117 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 IGHV3-13P01766 116 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 MT-ND5P03915 603 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 SBK2P0C263 348 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 ZNF12P17014 697 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 MVDP53602 400 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 CRISP3P54108 245 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 UFM1P61960 85 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 C5orf46Q6UWT4 87 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 C17orf107Q6ZR85 190 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 C1QL4Q86Z23 238 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 UBLCP1Q8WVY7 318 aaPredicted RBP13.67□□□□□ -0.22
USP48-210ENST00000489108 SLC41A3Q96GZ6 507 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 OR52E6Q96RD3 313 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 RNF121Q9H920 327 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 KLHL14Q9P2G3 628 aa13.67□□□□□ -0.22
USP48-210ENST00000489108 ITM2AO43736 263 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 SERPINI2O75830 405 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 KRT75O95678 551 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 IGHMP01871 453 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 IGHV4-38-2P0DP08 117 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 IL12AP29459 219 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 RBMXP38159 391 aaKnown RBP13.66□□□□□ -0.22
USP48-210ENST00000489108 MTNR1AP48039 350 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 CSNK1A1P48729 337 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 SLC3A1Q07837 685 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 PMS2P3Q13401 168 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 SPRNQ5BIV9 151 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 FAM209AQ5JX71 171 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 RHOUQ7L0Q8 258 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms