RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PRSS27Q9BQR3 290 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 TAS2R5Q9NYW4 299 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 FN1P02751 2386 aaKnown RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 A0A1W2PRG6 482 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 TLX2O43763 284 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 RAB36O95755 333 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 CELA3BP08861 270 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 OR4A8P0C604 315 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 CD79AP11912 226 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 B4GALT1P15291 398 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 KDELR2P33947 212 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 PPOXP50336 477 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 KRTAP1-1Q07627 177 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 ADIPOQQ15848 244 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 PIWIL3Q7Z3Z3 882 aaKnown RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF525Q8N782 197 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 TMEM239Q8WW34 195 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 TMEM54Q969K7 222 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 CMTM5Q96DZ9 223 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 TPD52L3Q96J77 140 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 SEC61A2Q9H9S3 476 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 MYOZ1Q9NP98 299 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 MEPEQ9NQ76 525 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 B3GNT2Q9NY97 397 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 GLTPQ9NZD2 209 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 ARMCX1Q9P291 453 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 RIMS3Q9UJD0 308 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
SPTLC1-207ENST00000488921 HTR3EA5X5Y0 456 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 CENPBD1B2RD01 187 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MCIDASD6RGH6 385 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 BLOC1S5-TXNDC5H3BN57 136 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 NDUFS8O00217 210 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 CD5LO43866 347 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 OR7A10O76100 309 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 FARS2O95363 451 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 BCL10O95999 233 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 IGHG1P01857 330 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 HLA-HP01893 362 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 ERCC1P07992 297 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 COX4I1P13073 169 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 TNFRSF1BP20333 461 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 NPR2P20594 1047 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 OR1E2P47887 323 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 PDLIM4P50479 330 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 DAP3P51398 398 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 UGT2B15P54855 530 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 SELENOWP63302 87 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 ST3GAL3Q11203 375 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 DAG1Q14118 895 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MELKQ14680 651 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MST1LQ2TV78 715 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 NKAIN4Q8IVV8 208 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 LRRC17Q8N6Y2 441 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 POU5F2Q8N7G0 328 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 TMEM255BQ8WV15 326 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 HTRA1Q92743 480 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 SGTBQ96EQ0 304 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 PRRC1Q96M27 445 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 SORCS2Q96PQ0 1159 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 HOPXQ9BPY8 73 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MYLK2Q9H1R3 596 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 PLK3Q9H4B4 646 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 NOX3Q9HBY0 568 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 MED31Q9Y3C7 131 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 SPEF1Q9Y4P9 236 aa11.97□□□□□ -0.49
SPTLC1-207ENST00000488921 YLPM1P49750 1951 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PGA4P0DJD7 388 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PGA3P0DJD8 388 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 NR2C1P13056 603 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 FUT1P19526 365 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PTDSS1P48651 473 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 CLRN1P58418 232 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 RPS23P62266 143 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 HGFACQ04756 655 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 LOXL1Q08397 574 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 SNTB2Q13425 540 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PIN1Q13526 163 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 TRPM8Q7Z2W7 1104 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 DPPA2Q7Z7J5 298 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PFN4Q8NHR9 129 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 LIPHQ8WWY8 451 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 VRK1Q99986 396 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 RAB1BQ9H0U4 201 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 EFCAB1Q9HAE3 211 aa11.96□□□□□ -0.49
SPTLC1-207ENST00000488921 ALPK2Q86TB3 2170 aa11.96□□□□□ -0.5
SPTLC1-207ENST00000488921 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 hCG_2039718K7EN88 272 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms