RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MCIDASD6RGH6 385 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 BCL10O95999 233 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CSNK1A1P48729 337 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 PPA1Q15181 289 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CEACAM16Q2WEN9 425 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 FAM122BQ7Z309 247 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 HDDC2Q7Z4H3 204 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 GPR137CQ8N3F9 429 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 OR51A7Q8NH64 312 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF566Q969W8 418 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 HS3ST6Q96QI5 342 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 TSPAN32Q96QS1 320 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 KCNK17Q96T54 332 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CHID1Q9BWS9 393 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CLEC4MQ9H2X3 399 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 KRCC1Q9NPI7 259 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 CCM2LQ9NUG4 571 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 STX18Q9P2W9 335 aaKnown RBP16.34■□□□□ 0.21
PTCD3-217ENST00000488801 ARID1AO14497 2285 aa16.34■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF726A6NNF4 738 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 ZNF99A8MXY4 864 aaPredicted RBP16.33■□□□□ 0.2
PTCD3-217ENST00000488801 TNFRSF11BO00300 401 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 EBAG9O00559 213 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 CASKO14936 926 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 IGHG1P01857 330 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 TBRG1Q3YBR2 411 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 CARD17Q5XLA6 110 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 HMBOX1Q6NT76 420 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 LRFN4Q6PJG9 635 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 THSD4Q6ZMP0 1018 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 TMEM200AQ86VY9 491 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 SPATA24Q86W54 205 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 CDC20BQ86Y33 519 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 WFDC8Q8IUA0 241 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 LINC00471Q8N535 108 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 DUS3LQ96G46 650 aaKnown RBP16.33■□□□□ 0.2
PTCD3-217ENST00000488801 PLEKHF2Q9H8W4 249 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 OBP2BQ9NPH6 170 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 GLTPQ9NZD2 209 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 AMDHD2Q9Y303 409 aa16.33■□□□□ 0.2
PTCD3-217ENST00000488801 UNC119BA6NIH7 251 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 M0R3G1 203 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 OR10H3O60404 316 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 FKBP6O75344 327 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 TRMUO75648 421 aaKnown RBP16.32■□□□□ 0.2
PTCD3-217ENST00000488801 KRT33AO76009 404 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 NDUFB2O95178 105 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 CD14P08571 375 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 ACADSP16219 412 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 NR1H2P55055 460 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 CTXN1P60606 82 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 RPL27P61353 136 aaKnown RBP16.32■□□□□ 0.2
PTCD3-217ENST00000488801 HIKESHIQ53FT3 197 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 NCMAPQ5T1S8 102 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 C10orf128Q5T292 105 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 FAM205BPQ63HN1 556 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 ANKRD16Q6P6B7 361 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 OR9Q2Q8NGE9 314 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 HDAC2Q92769 488 aaKnown RBP16.32■□□□□ 0.2
PTCD3-217ENST00000488801 POLDIP3Q9BY77 421 aaKnown RBP16.32■□□□□ 0.2
PTCD3-217ENST00000488801 ULBP2Q9BZM5 246 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 REEP1Q9H902 201 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 B3GAT2Q9NPZ5 323 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 NRIP3Q9NQ35 241 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 TMCC3Q9ULS5 477 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
PTCD3-217ENST00000488801 ARRDC5A6NEK1 342 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ARF1P84077 181 aaKnown RBP16.31■□□□□ 0.2
PTCD3-217ENST00000488801 TSPAN31Q12999 210 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 CCNIQ14094 377 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ZNF620Q6ZNG0 422 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 OR6N1Q8NGY5 312 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 OR52N5Q8NH56 324 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 MUCL1Q96DR8 90 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 PIK3IP1Q96FE7 263 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 KATNB1Q9BVA0 655 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 SMURF2Q9HAU4 748 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ZNF224Q9NZL3 707 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 CRNNQ9UBG3 495 aaPredicted RBP16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
PTCD3-217ENST00000488801 ADAM18Q9Y3Q7 739 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 SAMHD1Q9Y3Z3 626 aaKnown RBP16.31■□□□□ 0.2
PTCD3-217ENST00000488801 AKAP9Q99996 3911 aa16.31■□□□□ 0.2
PTCD3-217ENST00000488801 CREBBPQ92793 2442 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 ZNF503-AS2A6NEH8 195 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 DPRXA6NFQ7 191 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 TXNDC12O95881 172 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 CST1P01037 141 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 IFNGR2P38484 337 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 PPP1R8Q12972 351 aaKnown RBP16.3■□□□□ 0.2
PTCD3-217ENST00000488801 MICAQ29983 383 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 MESTQ5EB52 335 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 ARIH2OSQ8N7S6 290 aa16.3■□□□□ 0.2
PTCD3-217ENST00000488801 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms