RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DGCR6LQ9BY27 220 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 ULBP2Q9BZM5 246 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 ACTR6Q9GZN1 396 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 OR10A4Q9H209 315 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 OR52D1Q9H346 318 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 POFUT2Q9Y2G5 429 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 IER3IP1Q9Y5U9 82 aa13.87□□□□□ -0.19
C9orf3-219ENST00000488186 ARRDC5A6NEK1 342 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 NPIPB13A6NJU9 1138 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 NPIPB4C9JG80 1138 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 G3V2T6 193 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ARHGEF9O43307 516 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ENTPD5O75356 428 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 RAD51DO75771 328 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF23P17027 643 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 PRKACGP22612 351 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 NOS3P29474 1203 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 CD47Q08722 323 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 FHL1Q13642 323 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 GPR139Q6DWJ6 353 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF770Q6IQ21 691 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-219ENST00000488186 SHQ1Q6PI26 577 aaKnown RBP13.86□□□□□ -0.19
C9orf3-219ENST00000488186 RASSF6Q6ZTQ3 369 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 TMEM179BQ7Z7N9 219 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZDHHC13Q8IUH4 622 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 TMEM123Q8N131 208 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 LRRC75AQ8NAA5 344 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 SYT14Q8NB59 555 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 FAM222BQ8WU58 562 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 HSD17B8Q92506 261 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 S100PBPQ96BU1 408 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 CENPNQ96H22 339 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZC3HAV1LQ96H79 300 aaKnown RBP13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF570Q96NI8 536 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 DACH2Q96NX9 599 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ERMAPQ96PL5 475 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-219ENST00000488186 TSPAN32Q96QS1 320 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 SEMA6AQ9H2E6 1030 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 CRLF2Q9HC73 371 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 GPR35Q9HC97 309 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF226Q9NYT6 803 aa13.86□□□□□ -0.19
C9orf3-219ENST00000488186 CENPBD1B2RD01 187 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 TRMUO75648 421 aaKnown RBP13.85□□□□□ -0.19
C9orf3-219ENST00000488186 IGHMP01871 453 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 QDPRP09417 244 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 EPXP11678 715 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 COX5AP20674 150 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 SH3BGRP55822 239 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-219ENST00000488186 CEACAM16Q2WEN9 425 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 ARMC4Q5T2S8 1044 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 FBXW10Q5XX13 1052 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 KLHL24Q6TFL4 600 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 THSD4Q6ZMP0 1018 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF620Q6ZNG0 422 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 SVOPLQ8N434 492 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 ARIH2OSQ8N7S6 290 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 FNDC8Q8TC99 324 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 TMEM54Q969K7 222 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 WFIKKN1Q96NZ8 548 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 EGLN3Q9H6Z9 239 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 NTN4Q9HB63 628 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 NRIP3Q9NQ35 241 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 TBC1D23Q9NUY8 699 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 CRIM1Q9NZV1 1036 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 KCNN3Q9UGI6 736 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 ADAM18Q9Y3Q7 739 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 CDH10Q9Y6N8 788 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 NAV2Q8IVL1 2488 aa13.85□□□□□ -0.19
C9orf3-219ENST00000488186 NOTCH2Q04721 2471 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 TEX13CA0A0J9YWL9 993 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 H3BN98 237 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 PPP1R3DO95685 299 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 BAG2O95816 211 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 ITGA5P08648 1049 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 PGA4P0DJD7 388 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 PGA3P0DJD8 388 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 POU1F1P28069 291 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 SDHAP31040 664 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 GUCA1AP43080 201 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-219ENST00000488186 ZNF84P51523 738 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 FOXG1P55316 489 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-219ENST00000488186 MYBPC1Q00872 1141 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 RUNX1T1Q06455 604 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 CLEC12AQ5QGZ9 265 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 PHYHD1Q5SRE7 291 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 HIST2H2BCQ6DN03 193 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 P2RY8Q86VZ1 359 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 JAZF1Q86VZ6 243 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 HS3ST5Q8IZT8 346 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 C1orf162Q8NEQ5 155 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-219ENST00000488186 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 TEX47Q8TBZ9 253 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 C14orf79Q96F83 325 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 Q96M85 177 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 GPX7Q96SL4 187 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms