RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MTPNP58546 118 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 RBBP4Q09028 425 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 ZP4Q12836 540 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 RAB39AQ14964 217 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 ZNF74Q16587 644 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 TRMT5Q32P41 509 aaKnown RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 TTMPQ5BVD1 217 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 ENTPD8Q5MY95 495 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 LRFN4Q6PJG9 635 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 RETREG3Q86VR2 466 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 TSPYL5Q86VY4 417 aaPredicted RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 LRP11Q86VZ4 500 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 SKA3Q8IX90 412 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 DPP10Q8N608 796 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 LRRC17Q8N6Y2 441 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 THOC1Q96FV9 657 aaKnown RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 ATP6V1G3Q96LB4 118 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 CGREF1Q99674 301 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 SYT3Q9BQG1 590 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 DENND2DQ9H6A0 471 aaPredicted RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 LEF1Q9UJU2 399 aaPredicted RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 NDUFAF1Q9Y375 327 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 SPEF1Q9Y4P9 236 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 CHP2O43745 196 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 SYNGR3O43761 229 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 OR6A2O95222 327 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 RAB36O95755 333 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 TCN1P20061 433 aaPredicted RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 CD247P20963 164 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 COL8A2P25067 703 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 APEX1P27695 318 aaKnown RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 ALDH3B1P43353 468 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 FXNQ16595 210 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 CYP51A1Q16850 503 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 ELFN2Q5R3F8 820 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 SLC35D2Q76EJ3 337 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 PIWIL3Q7Z3Z3 882 aaKnown RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 DHDDSQ86SQ9 333 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 CARM1Q86X55 608 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 SNX32Q86XE0 403 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 ZNF584Q8IVC4 421 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 OR6X1Q8NH79 312 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 ADAMTS16Q8TE57 1224 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 HPS1Q92902 700 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 SNX18Q96RF0 628 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 C19orf24Q9BVV8 132 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 RABEP2Q9H5N1 569 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 ZNF385DQ9H6B1 395 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 KAT8Q9H7Z6 458 aaKnown RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 GLTPQ9NZD2 209 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 MYEF2Q9P2K5 600 aaKnown RBP10.49□□□□□ -0.73
VPS16-208ENST00000487461 FZR1Q9UM11 496 aa10.49□□□□□ -0.73
VPS16-208ENST00000487461 M0R233 179 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 UBL3O95164 117 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 HPXP02790 462 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 SERPINA5P05154 406 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 GZMMP51124 257 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 MAD2L1BPQ15013 274 aaPredicted RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 GKAP1Q5VSY0 366 aaPredicted RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 TTC33Q6PID6 262 aaPredicted RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 SLC22A24Q8N4F4 322 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 VANGL1Q8TAA9 524 aaPredicted RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 DYDC1Q8WWB3 177 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 TAMM41Q96BW9 452 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 SH3GL3Q99963 347 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 MS4A5Q9H3V2 200 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 NANSQ9NR45 359 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 TMEFF2Q9UIK5 374 aaPredicted RBP10.48□□□□□ -0.73
VPS16-208ENST00000487461 SLC7A7Q9UM01 511 aa10.48□□□□□ -0.73
VPS16-208ENST00000487461 TRAPPC13A5PLN9 417 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 KPNA4O00629 521 aaPredicted RBP10.47□□□□□ -0.73
VPS16-208ENST00000487461 ANGPT2O15123 496 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 DHHO43323 396 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 RNF13O43567 381 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 ASAH2BP0C7U1 165 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 OR8G3PP0DMU2 310 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 CRYBA2P53672 197 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 CDH15P55291 814 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 GALK2Q01415 458 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 NFYCQ13952 458 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 CCNIQ14094 377 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 MELKQ14680 651 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 PATL1Q86TB9 770 aaKnown RBP10.47□□□□□ -0.73
VPS16-208ENST00000487461 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
VPS16-208ENST00000487461 OR10A6Q8NH74 314 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 TSPEARQ8WU66 669 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 STON2Q8WXE9 905 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 RDH5Q92781 318 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 YIPF5Q969M3 257 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 SLC25A44Q96H78 314 aaPredicted RBP10.47□□□□□ -0.73
VPS16-208ENST00000487461 PRSS27Q9BQR3 290 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 ZNF426Q9BUY5 554 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 TMEM38BQ9NVV0 291 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 DUSP13Q9UII6 198 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms