RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FANCMQ8IYD8 2048 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 MYH6P13533 1939 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 A0A1B0GVL5 298 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 SNTNA6NMZ2 147 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 TMEM110-MUSTN1A8MSY1 372 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 FOXE1O00358 373 aaPredicted RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 DCTN6O00399 190 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 IGHV3-48P01763 117 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 UBTFL1P0CB47 393 aaPredicted RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 HTR1FP30939 366 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 QARSP47897 775 aaKnown RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 PKNOX1P55347 436 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 RIPPLY3P57055 190 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 SEC61GP60059 68 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 DEFB103AP81534 67 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF45Q02386 682 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 DDX39BQ13838 428 aaKnown RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ARL6IP1Q15041 203 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 NSUN5P1Q3KNT7 163 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF544Q6NX49 715 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 UQCC3Q6UW78 93 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 TMEM179BQ7Z7N9 219 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF100Q8IYN0 542 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 TMEM252Q8N6L7 170 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 C14orf178Q8N769 122 aaPredicted RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF564Q8TBZ8 553 aaPredicted RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 ANKRD49Q8WVL7 239 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 MARC2Q969Z3 335 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 C10orf35Q96D05 121 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 TGS1Q96RS0 853 aaKnown RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 RNF2Q99496 336 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 UPF3BQ9BZI7 483 aaKnown RBP3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 YY1AP1Q9H869 796 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 SGK2Q9HBY8 427 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 PRR34Q9NV39 138 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 B4GALT7Q9UBV7 327 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 DCDC2Q9UHG0 476 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 CTNNA3Q9UI47 895 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 STAP1Q9ULZ2 295 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 PIGLQ9Y2B2 252 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 DOCK5Q9H7D0 1870 aa3.56□□□□□ -1.84
PRPF38A-203ENST00000487160 FAM186AA6NE01 2351 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MYO7AQ13402 2215 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 EPG5Q9HCE0 2579 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 IGKV1D-8A0A087WSZ0 117 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 XKRY2A2RUG3 117 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 HAT1O14929 419 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MBTPS2O43462 519 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MED7O43513 233 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 STAMBPO95630 424 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 LGI1O95970 557 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 UQCRFS1P1P0C7P4 283 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 CALCRP30988 508 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 UGT1A5P35504 534 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 TCEAL5Q5H9L2 206 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 PHYHD1Q5SRE7 291 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 OR2A2Q6IF42 318 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 TMEM179Q6ZVK1 233 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 FAM220AQ7Z4H9 259 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 TRIM69Q86WT6 500 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 VRK2Q86Y07 508 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF584Q8IVC4 421 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 OR52H1Q8NGJ2 320 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 OR52I1Q8NGK6 324 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 OR1L4Q8NGR5 311 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 OR9A1PQ8NGU1 263 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MAGEE2Q8TD90 523 aaPredicted RBP3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 CHCHD10Q8WYQ3 142 aaPredicted RBP3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 FGF11Q92914 225 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 NT5C3BQ969T7 300 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 TUBGCP3Q96CW5 907 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 C16orf74Q96GX8 76 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 SEC22AQ96IW7 307 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 TCEANC2Q96MN5 208 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 SMIM14Q96QK8 99 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 CLCC1Q96S66 551 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 SLC39A3Q9BRY0 314 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 YTHDF1Q9BYJ9 559 aaKnown RBP3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 RBKSQ9H477 322 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 REEP4Q9H6H4 257 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 NMRK1Q9NWW6 199 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MARCH5Q9NX47 278 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 CD274Q9NZQ7 290 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 ABCG2Q9UNQ0 655 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 MYO10Q9HD67 2058 aa3.55□□□□□ -1.84
PRPF38A-203ENST00000487160 DENND4AQ7Z401 1863 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 TCRBV9S1A1TA0A576 114 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 HELTA6NFD8 242 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 CCDC169A6NNP5 214 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 HIP1O00291 1037 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 TSPAN12O95859 305 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 LY6G6DO95868 133 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 NPR2P20594 1047 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 NBL1P41271 181 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 STX17P56962 302 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 GBE1Q04446 702 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 SIGLEC14Q08ET2 396 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 GPNMBQ14956 572 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 DUSP7Q16829 419 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms