RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RAB1BQ9H0U4 201 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 SPNS1Q9H2V7 528 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 HRH4Q9H3N8 390 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CAB39LQ9H9S4 337 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CALHM2Q9HA72 323 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CD274Q9NZQ7 290 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 FBXO5Q9UKT4 447 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 GUCA1BQ9UMX6 200 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 MED12Q93074 2177 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 VPS13CQ709C8 3753 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 A0A0G2JN53 185 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 A0A1W2PPR1 153 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ANKRD61A6NGH8 418 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 NPIPB13A6NJU9 1138 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 LRRC3CA6NJW4 275 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 NPIPB4C9JG80 1138 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TP53I11O14683 189 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF354AO60765 605 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 HAUS5O94927 633 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SNAP29O95721 258 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SERPINA5P05154 406 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 THBDP07204 575 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 CPA3P15088 417 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 CPOXP36551 454 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 DIO3P55073 304 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 HSF2Q03933 536 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 MZT1Q08AG7 82 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 BIKQ13323 160 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SNTA1Q13424 505 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 FAM189A2Q15884 450 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ACKR1Q16570 336 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 C6orf183Q5T699 404 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 RAET1LQ5VY80 246 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 VASNQ6EMK4 673 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TRIM40Q6P9F5 258 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SLC35D2Q76EJ3 337 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TRPM8Q7Z2W7 1104 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TMPRSS11BQ86T26 416 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 GPR180Q86V85 440 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 THOC6Q86W42 341 aaKnown RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 KLHDC8AQ8IYD2 350 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 FAM86B1Q8N7N1 296 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 OR2L5Q8NG80 312 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 OCC1Q8TAD7 63 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 FCGR1BQ92637 280 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 GTF3AQ92664 365 aaKnown RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 MS4A6EQ96DS6 147 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 MTERF3Q96E29 417 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 BSCL2Q96G97 398 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 C16orf58Q96GQ5 468 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 C16orf92Q96LL3 132 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF597Q96LX8 424 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 DOHHQ9BU89 302 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SFXN3Q9BWM7 321 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ROGDIQ9GZN7 287 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 PIGMQ9H3S5 423 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TOR3AQ9H497 397 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 SH2D2AQ9NP31 389 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF226Q9NYT6 803 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 CNOT2Q9NZN8 540 aaKnown RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 FBLN5Q9UBX5 448 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 BCAP29Q9UHQ4 241 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TMEFF2Q9UIK5 374 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 UTS2RQ9UKP6 389 aa6.07□□□□□ -1.44
HDAC3-209ENST00000486618 RBMX2Q9Y388 322 aaKnown RBP6.07□□□□□ -1.44
HDAC3-209ENST00000486618 TEX13CA0A0J9YWL9 993 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZCWPW2A0A1B0GU75 182 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZC3H12DA2A288 527 aaKnown RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 LRIT2A6NDA9 550 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ANKDD1BA6NHY2 528 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 C4orf51C9J302 202 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 TSPAN2O60636 221 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 FCMRO60667 390 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ACSL3O95573 720 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 APOC1P02654 83 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 HPNP05981 417 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 GPIP06744 558 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 F7P08709 466 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 TFPTP0C1Z6 253 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 C1GALT1C1LP0DN25 315 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 GNAZP19086 355 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 MALP21145 153 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 BDKRB2P30411 391 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 CXCR5P32302 372 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 LIMS1P48059 325 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 RIDAP52758 137 aaKnown RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 PLA2G16P53816 162 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 LIM2P55344 173 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 PRR5P85299 388 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 STX3Q13277 289 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 GAB1Q13480 694 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 SNAPC1Q16533 368 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 EXOC3L2Q2M3D2 409 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 METTL21CQ5VZV1 264 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZBTB49Q6ZSB9 765 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 SLC29A4Q7RTT9 530 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ABHD12BQ7Z5M8 362 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 CENPVQ7Z7K6 275 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms