RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 TFPIP10646 304 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 SLC6A6P31641 620 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 FXYD6P3P58550 94 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 RAC3P60763 192 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 SIRPAP78324 504 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 LTBQ06643 244 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 FAM27E3Q08E93 113 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 FHL1Q13642 323 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 GINS1Q14691 196 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 ZNF239Q16600 458 aaKnown RBP15.1■□□□□ 0.01
VIM-205ENST00000485947 CASP12Q6UXS9 341 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 NANOGNBQ7Z5D8 188 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 ZNF610Q8N9Z0 462 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 OR2T33Q8NG76 320 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 OR51A7Q8NH64 312 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 FAM81AQ8TBF8 368 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 RNF128Q8TEB7 428 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 SAMD8Q96LT4 415 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 MOGAT1Q96PD6 335 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 TNFRSF13CQ96RJ3 184 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 USB1Q9BQ65 265 aaKnown RBP15.1■□□□□ 0.01
VIM-205ENST00000485947 ASPNQ9BXN1 380 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 OR11A1Q9GZK7 315 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 FTCDNL1E5RQL4 147 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 LRRN3E7EW58 273 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 HMGN1P05114 100 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 IGFBP1P08833 259 aaPredicted RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 GTF2E2P29084 291 aaKnown RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 GRK5P34947 590 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 ART1P52961 327 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 ISL1P61371 349 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 IL5RAQ01344 420 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 TEKQ02763 1124 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 PGGHGQ32M88 737 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 TMEM176BQ3YBM2 270 aaPredicted RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 PAMR1Q6UXH9 720 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 SCAIQ8N9R8 606 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 OR5J2Q8NH18 312 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 FBLIM1Q8WUP2 373 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 TRUB1Q8WWH5 349 aaKnown RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 ARL5BQ96KC2 179 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 SLC38A2Q96QD8 506 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 GPX7Q96SL4 187 aaPredicted RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 OPN3Q9H1Y3 402 aaPredicted RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 TMEM185BQ9H7F4 350 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 PLEKHF2Q9H8W4 249 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 IMPAD1Q9NX62 359 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 MRPL39Q9NYK5 338 aaKnown RBP15.09■□□□□ 0.01
VIM-205ENST00000485947 TRAPPC4Q9Y296 219 aa15.09■□□□□ 0.01
VIM-205ENST00000485947 ABCA4P78363 2273 aa15.08■□□□□ 0
VIM-205ENST00000485947 LIPT2A6NK58 231 aa15.08■□□□□ 0
VIM-205ENST00000485947 PMS2P2O95744 297 aa15.08■□□□□ 0
VIM-205ENST00000485947 RAF1P04049 648 aa15.08■□□□□ 0
VIM-205ENST00000485947 IMPDH2P12268 514 aa15.08■□□□□ 0
VIM-205ENST00000485947 CRYGSP22914 178 aa15.08■□□□□ 0
VIM-205ENST00000485947 SFTPDP35247 375 aa15.08■□□□□ 0
VIM-205ENST00000485947 TMEM201Q5SNT2 666 aa15.08■□□□□ 0
VIM-205ENST00000485947 TMEM236Q5W0B7 351 aa15.08■□□□□ 0
VIM-205ENST00000485947 LNX2Q8N448 690 aa15.08■□□□□ 0
VIM-205ENST00000485947 LRRC17Q8N6Y2 441 aa15.08■□□□□ 0
VIM-205ENST00000485947 ADPRHL1Q8NDY3 354 aa15.08■□□□□ 0
VIM-205ENST00000485947 ATP6V1C2Q8NEY4 427 aa15.08■□□□□ 0
VIM-205ENST00000485947 SLC25A36Q96CQ1 311 aa15.08■□□□□ 0
VIM-205ENST00000485947 WFIKKN1Q96NZ8 548 aa15.08■□□□□ 0
VIM-205ENST00000485947 OR5B2Q96R09 309 aa15.08■□□□□ 0
VIM-205ENST00000485947 MED18Q9BUE0 208 aa15.08■□□□□ 0
VIM-205ENST00000485947 HDHD5Q9BXW7 423 aa15.08■□□□□ 0
VIM-205ENST00000485947 YTHDF1Q9BYJ9 559 aaKnown RBP15.08■□□□□ 0
VIM-205ENST00000485947 UBAP1Q9NZ09 502 aa15.08■□□□□ 0
VIM-205ENST00000485947 KLHL13Q9P2N7 655 aa15.08■□□□□ 0
VIM-205ENST00000485947 BHLHE40O14503 412 aa15.07■□□□□ 0
VIM-205ENST00000485947 DNPH1O43598 174 aa15.07■□□□□ 0
VIM-205ENST00000485947 APEHP13798 732 aaKnown RBP15.07■□□□□ 0
VIM-205ENST00000485947 PSMB1P20618 241 aaKnown RBP15.07■□□□□ 0
VIM-205ENST00000485947 GRPRP30550 384 aa15.07■□□□□ 0
VIM-205ENST00000485947 AGTR1P30556 359 aa15.07■□□□□ 0
VIM-205ENST00000485947 CSNK2A1P68400 391 aaPredicted RBP15.07■□□□□ 0
VIM-205ENST00000485947 CD47Q08722 323 aa15.07■□□□□ 0
VIM-205ENST00000485947 MAD2L1BPQ15013 274 aaPredicted RBP15.07■□□□□ 0
VIM-205ENST00000485947 OR7A5Q15622 319 aa15.07■□□□□ 0
VIM-205ENST00000485947 CLEC12AQ5QGZ9 265 aa15.07■□□□□ 0
VIM-205ENST00000485947 ACSM5Q6NUN0 579 aa15.07■□□□□ 0
VIM-205ENST00000485947 UGT2A3Q6UWM9 527 aa15.07■□□□□ 0
VIM-205ENST00000485947 THSD4Q6ZMP0 1018 aa15.07■□□□□ 0
VIM-205ENST00000485947 DPY19L2P2Q6ZN68 376 aa15.07■□□□□ 0
VIM-205ENST00000485947 TMPPEQ6ZT21 453 aa15.07■□□□□ 0
VIM-205ENST00000485947 FCRLAQ7L513 359 aa15.07■□□□□ 0
VIM-205ENST00000485947 ENTHD1Q8IYW4 607 aa15.07■□□□□ 0
VIM-205ENST00000485947 OR8J1Q8NGP2 316 aa15.07■□□□□ 0
VIM-205ENST00000485947 OR4Q3Q8NH05 313 aa15.07■□□□□ 0
VIM-205ENST00000485947 IFT27Q9BW83 186 aa15.07■□□□□ 0
VIM-205ENST00000485947 BCO1Q9HAY6 547 aa15.07■□□□□ 0
VIM-205ENST00000485947 KLHL9Q9P2J3 617 aa15.07■□□□□ 0
VIM-205ENST00000485947 GPR52Q9Y2T5 361 aa15.07■□□□□ 0
VIM-205ENST00000485947 BLOC1S5-TXNDC5H3BN57 136 aa15.06■□□□□ 0
VIM-205ENST00000485947 M0R082 166 aa15.06■□□□□ 0
VIM-205ENST00000485947 ARPC3O15145 178 aa15.06■□□□□ 0
VIM-205ENST00000485947 IDH3BO43837 385 aa15.06■□□□□ 0
VIM-205ENST00000485947 OPN1LWP04000 364 aa15.06■□□□□ 0
VIM-205ENST00000485947 YES1P07947 543 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms