RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GABARAPL2P60520 117 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 CAMK2DQ13557 499 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 DOC2BQ14184 412 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 LY6DQ14210 128 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 ETFDHQ16134 617 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 PDSS1Q5T2R2 415 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SF3B5Q9BWJ5 86 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 VAMP5O95183 116 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 STSP08842 583 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 PSKH1P11801 424 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 ATP6V1B1P15313 513 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 GSTT1P30711 240 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SELENOPP49908 381 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 RPS3AP61247 264 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 C1DQ13901 141 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 PHYHD1Q5SRE7 291 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 B3GNT6Q6ZMB0 384 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 MEPCEQ7L2J0 689 aaKnown RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 GID4Q8IVV7 300 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 TMEM123Q8N131 208 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 TSPAN14Q8NG11 270 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 OR4F15Q8NGB8 312 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
LRIF1-202ENST00000485275 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 RNFT2Q96EX2 444 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 Q96MT0 163 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 OR2M2Q96R28 347 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SLX1AQ9BQ83 275 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 TIGARQ9NQ88 270 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 CLCF1Q9UBD9 225 aa12.92□□□□□ -0.34
LRIF1-202ENST00000485275 IGLV1-36A0A0B4J1U3 117 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 TRIM64CA6NLI5 447 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 XKRYO14609 159 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 MT-ND2P03891 347 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
LRIF1-202ENST00000485275 MTNR1AP48039 350 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 SLC25A1P53007 311 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 RASGEF1BQ0VAM2 473 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.91□□□□□ -0.34
LRIF1-202ENST00000485275 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 NOXO1Q8NFA2 376 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 OR6X1Q8NH79 312 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 FAR1Q8WVX9 515 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 ZMYND19Q96E35 227 aaPredicted RBP12.91□□□□□ -0.34
LRIF1-202ENST00000485275 FOXN4Q96NZ1 517 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 TEAD3Q99594 435 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 COPS4Q9BT78 406 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 ASF1BQ9NVP2 202 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 CLEC4AQ9UMR7 237 aa12.91□□□□□ -0.34
LRIF1-202ENST00000485275 GTF3C1Q12789 2109 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 IGKV3D-15A0A087WSY6 115 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 A6NIZ1 184 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 J3QRE1 110 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 CDK1P06493 297 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 RAP1BP61224 184 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 RAP1AP62834 184 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 ST3GAL4Q11206 333 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 ZBTB46Q86UZ6 589 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 TEX19Q8NA77 164 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 SARAFQ96BY9 339 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 CNTNAP3BQ96NU0 1288 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 CNTNAP3Q9BZ76 1288 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 ADGRL4Q9HBW9 690 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 SRA1Q9HD15 236 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 MRPS18AQ9NVS2 196 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 PAQR5Q9NXK6 330 aaPredicted RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 SCN3BQ9NY72 215 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 CNOT2Q9NZN8 540 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 BLOC1S6Q9UL45 172 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 TPRKBQ9Y3C4 175 aa12.9□□□□□ -0.34
LRIF1-202ENST00000485275 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
LRIF1-202ENST00000485275 OR14I1A6ND48 311 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RENP00797 406 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 TFP02787 698 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RPS7P62081 194 aaKnown RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SPARTQ8N0X7 666 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms