RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PRKAR1BP31321 381 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 CAPZA2P47755 286 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 HILS1P60008 231 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 FADDQ13158 208 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 RPS26P11Q5JNZ5 115 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-227ENST00000485102 PHYHD1Q5SRE7 291 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 C6orf10Q5SRN2 563 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 ARPINQ7Z6K5 226 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 CARM1Q86X55 608 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 SNX32Q86XE0 403 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 OR51F2Q8NH61 342 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF416Q9BWM5 594 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 RSPO3Q9BXY4 272 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-227ENST00000485102 A4GALTQ9NPC4 353 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 B3GAT2Q9NPZ5 323 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF224Q9NZL3 707 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF346Q9UL40 294 aaKnown RBP11.17□□□□□ -0.62
HDAC6-227ENST00000485102 A0A087WUJ7 227 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 A0A1B0GWA3 101 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 M0R3G1 203 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 RP2O75695 350 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 RAB1AP62820 205 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 HOXC5Q00444 222 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 KLF10Q13118 480 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 RGNQ15493 299 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 ULK3Q6PHR2 472 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF813Q6ZN06 617 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 PIWIL3Q7Z3Z3 882 aaKnown RBP11.16□□□□□ -0.62
HDAC6-227ENST00000485102 UEVLDQ8IX04 471 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 DPP10Q8N608 796 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 BBS10Q8TAM1 723 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 YIPF5Q969M3 257 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 VPS33AQ96AX1 596 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF275Q9NSD4 429 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-227ENST00000485102 MRPL39Q9NYK5 338 aaKnown RBP11.16□□□□□ -0.62
HDAC6-227ENST00000485102 NKIRAS2Q9NYR9 191 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 RPS6KB2Q9UBS0 482 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 PCDHB10Q9UN67 800 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 POFUT2Q9Y2G5 429 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 NOX1Q9Y5S8 564 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 GMEB1Q9Y692 573 aa11.16□□□□□ -0.62
HDAC6-227ENST00000485102 TRIM77I1YAP6 450 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 WNT9BO14905 357 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SEC14L2O76054 403 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 UBL3O95164 117 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 HPRP00739 348 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SERPINA5P05154 406 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 CD79AP11912 226 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 HLA-DOBP13765 273 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 HTR2AP28223 471 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 LIMS1P48059 325 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 MYBPC1Q00872 1141 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 ALG10BQ5I7T1 473 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SHQ1Q6PI26 577 aaKnown RBP11.15□□□□□ -0.62
HDAC6-227ENST00000485102 DHRS4L2Q6PKH6 230 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 C1orf229Q6ZS94 237 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-227ENST00000485102 PXKQ7Z7A4 578 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 GTF2H4Q92759 462 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SLC47A1Q96FL8 570 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 EPYCQ99645 322 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 FOXB1Q99853 325 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SYT3Q9BQG1 590 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
HDAC6-227ENST00000485102 G6PC2Q9NQR9 355 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 TREM2Q9NZC2 230 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 SLC7A8Q9UHI5 535 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 TRRAPQ9Y4A5 3859 aa11.15□□□□□ -0.62
HDAC6-227ENST00000485102 IGLV3-9A0A075B6K5 115 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 SLC22A23A1A5C7 686 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF726A6NNF4 738 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 CLIC1O00299 241 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 ENTPD5O75356 428 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 RAB36O95755 333 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PNPP00491 289 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 BGLAPP02818 100 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 NUDT7P0C024 238 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 GIPRP48546 466 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PTDSS1P48651 473 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 GALK2Q01415 458 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PIGFQ07326 219 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PUDPQ08623 228 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 KRT72Q14CN4 511 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 GTDC1Q4AE62 458 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 LRIF1Q5T3J3 769 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 PEG10Q86TG7 708 aaKnown RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 LRP11Q86VZ4 500 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 FUNDC1Q8IVP5 155 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 GCDHQ92947 438 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-227ENST00000485102 TXNDC15Q96J42 360 aa11.14□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM43Q9BTV4 400 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms