RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GALK2Q01415 458 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 SRSF4Q08170 494 aaKnown RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 TSTQ16762 297 aaKnown RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 REP15Q6BDI9 236 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 USP51Q70EK9 711 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 DOK3Q7L591 496 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 DEFB108BQ8NET1 73 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 SLC38A4Q969I6 547 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 TMEM54Q969K7 222 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 WDR55Q9H6Y2 383 aaPredicted RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 TPT1P8Q9HAU6 139 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 C12orf10Q9HB07 376 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 BCL2L10Q9HD36 194 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 DDX28Q9NUL7 540 aaKnown RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 DCAF16Q9NXF7 216 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 SLC7A8Q9UHI5 535 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 LEF1Q9UJU2 399 aaPredicted RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
UBR4-213ENST00000483922 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 WNK2Q9Y3S1 2297 aa10.93□□□□□ -0.66
UBR4-213ENST00000483922 DNAJC9-AS1A6NH13 148 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 PLPP3O14495 311 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 RFXANKO14593 260 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 RAB36O95755 333 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 MAKP20794 623 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 BGNP21810 368 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 GTF2E2P29084 291 aaKnown RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 RPS23P62266 143 aaKnown RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 MIDNQ504T8 468 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 RGS7BPQ6MZT1 257 aaPredicted RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 PIWIL3Q7Z3Z3 882 aaKnown RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 SLC22A24Q8N4F4 322 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 SYNPRQ8TBG9 265 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 SLC35B4Q969S0 331 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 ULBP2Q9BZM5 246 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 DENND2DQ9H6A0 471 aaPredicted RBP10.92□□□□□ -0.66
UBR4-213ENST00000483922 NTN4Q9HB63 628 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 TCF7L2Q9NQB0 619 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 CALML5Q9NZT1 146 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 IFT52Q9Y366 437 aa10.92□□□□□ -0.66
UBR4-213ENST00000483922 UBOX5O94941 541 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 UBL3O95164 117 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 ZCCHC18P0CG32 403 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 NQO1P15559 274 aaKnown RBP10.91□□□□□ -0.66
UBR4-213ENST00000483922 HOXB9P17482 250 aaPredicted RBP10.91□□□□□ -0.66
UBR4-213ENST00000483922 FPR2P25090 351 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 EPHA3P29320 983 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 UCP2P55851 309 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 KLF3P57682 345 aaPredicted RBP10.91□□□□□ -0.66
UBR4-213ENST00000483922 ALG10BQ5I7T1 473 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 TMEM154Q6P9G4 183 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 MIER2Q8N344 545 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 LRRC17Q8N6Y2 441 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 SLC30A7Q8NEW0 376 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 OR6N1Q8NGY5 312 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 ZNF519Q8TB69 540 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 MGARPQ8TDB4 240 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 RAB39BQ96DA2 213 aa10.91□□□□□ -0.66
UBR4-213ENST00000483922 MRPL39Q9NYK5 338 aaKnown RBP10.91□□□□□ -0.66
UBR4-213ENST00000483922 A0A0G2JK05 382 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 ZNF726A6NNF4 738 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 IGHV1-46P01743 117 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 IGHV3-13P01766 116 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 LCKP06239 509 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 OR8G3PP0DMU2 310 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 BMP2P12643 396 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 RAD52P43351 418 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 MMP15P51511 669 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 BIDP55957 195 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 SEC61A1P61619 476 aaKnown RBP10.9□□□□□ -0.66
UBR4-213ENST00000483922 GLO1Q04760 184 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 RGNQ15493 299 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 PCGF3Q3KNV8 242 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 LINC00114Q6XXX2 140 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 PXKQ7Z7A4 578 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 JAZF1Q86VZ6 243 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 SCAIQ8N9R8 606 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
UBR4-213ENST00000483922 NPHS2Q9NP85 383 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 A4GALTQ9NPC4 353 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 TMEM38BQ9NVV0 291 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 TAS2R5Q9NYW4 299 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 GLTPQ9NZD2 209 aa10.9□□□□□ -0.66
UBR4-213ENST00000483922 KMT2CQ8NEZ4 4911 aaKnown RBP10.9□□□□□ -0.67
UBR4-213ENST00000483922 A0A0B4J2E0 115 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 A0A1B0GX12 115 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 CLDN25C9JDP6 229 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 C11orf98E9PRG8 122 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 BIRC5O15392 142 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 AKAP8O43823 692 aaKnown RBP10.89□□□□□ -0.67
UBR4-213ENST00000483922 SERPINI2O75830 405 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 MFN2O95140 757 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 SNAP29O95721 258 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 THY1P04216 161 aa10.89□□□□□ -0.67
UBR4-213ENST00000483922 MMP7P09237 267 aaPredicted RBP10.89□□□□□ -0.67
UBR4-213ENST00000483922 MDKP21741 143 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms