RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NOS3P29474 1203 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 CD47Q08722 323 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 COX10Q12887 443 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 MESTQ5EB52 335 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 RPL13AP3Q6NVV1 102 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 CD300LDQ6UXZ3 194 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 IQCF1Q8N6M8 205 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 POMGNT2Q8NAT1 580 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 NOXO1Q8NFA2 376 aa15.73■□□□□ 0.11
CPNE1-224ENST00000483359 HDAC2Q92769 488 aaKnown RBP15.73■□□□□ 0.11
CPNE1-224ENST00000483359 RNASE6Q93091 150 aaKnown RBP15.73■□□□□ 0.11
CPNE1-224ENST00000483359 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 TRMUO75648 421 aaKnown RBP15.72■□□□□ 0.11
CPNE1-224ENST00000483359 ACADSP16219 412 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 IGFBP5P24593 272 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 SDHAP31040 664 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 CD79BP40259 229 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 RPS6KA3P51812 740 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 ROR2Q01974 943 aaKnown RBP15.72■□□□□ 0.11
CPNE1-224ENST00000483359 FMODQ06828 376 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 KRR1Q13601 381 aaKnown RBP15.72■□□□□ 0.11
CPNE1-224ENST00000483359 LRRC36Q1X8D7 754 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 SLC35F1Q5T1Q4 408 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 C20orf196Q8IYI0 205 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 CBR4Q8N4T8 237 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 ZNF519Q8TB69 540 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 EME1Q96AY2 570 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 ZNF837Q96EG3 531 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-224ENST00000483359 LRRC46Q96FV0 321 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 ULBP2Q9BZM5 246 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 CRLF2Q9HC73 371 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 FOXD3Q9UJU5 478 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-224ENST00000483359 POFUT2Q9Y2G5 429 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 HCFC1P51610 2035 aa15.72■□□□□ 0.11
CPNE1-224ENST00000483359 NPIPB13A6NJU9 1138 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 NPIPB4C9JG80 1138 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 ZNF587BE7ETH6 402 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 XKRYO14609 159 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 RAD51DO75771 328 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 SEC14L2O76054 403 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 OSMP13725 252 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 CCKARP32238 428 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 PPP2R2BQ00005 443 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 TRIP10Q15642 601 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 FBXL19-AS1Q494R0 122 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 KDM4DQ6B0I6 523 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 STAC2Q6ZMT1 411 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 HDDC2Q7Z4H3 204 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 ARIH2OSQ8N7S6 290 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 OR4Q3Q8NH05 313 aa15.71■□□□□ 0.11
CPNE1-224ENST00000483359 SPTAN1Q13813 2472 aaKnown RBP15.71■□□□□ 0.11
CPNE1-224ENST00000483359 BHLHE40O14503 412 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 IMPA2O14732 288 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 ITGA5P08648 1049 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 DBPQ10586 325 aaPredicted RBP15.71■□□□□ 0.1
CPNE1-224ENST00000483359 OR2T33Q8NG76 320 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 RBM4BQ9BQ04 359 aaKnown RBP15.71■□□□□ 0.1
CPNE1-224ENST00000483359 RBM4Q9BWF3 364 aaKnown RBP15.71■□□□□ 0.1
CPNE1-224ENST00000483359 OSBPL10Q9BXB5 764 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 LINC00470Q9BZP3 86 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 ELOVL5Q9NYP7 299 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 GLTPQ9NZD2 209 aa15.71■□□□□ 0.1
CPNE1-224ENST00000483359 NKX1-2Q9UD57 310 aaPredicted RBP15.71■□□□□ 0.1
CPNE1-224ENST00000483359 TMEFF2Q9UIK5 374 aaPredicted RBP15.71■□□□□ 0.1
CPNE1-224ENST00000483359 DOPEY2Q9Y3R5 2298 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 OR6C65A6NJZ3 312 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 SLC2A10O95528 541 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 HIST1H1CP16403 213 aaKnown RBP15.7■□□□□ 0.1
CPNE1-224ENST00000483359 UGT2B10P36537 528 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 ITGADQ13349 1161 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 CEACAM16Q2WEN9 425 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 LPCAT4Q643R3 524 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 PTCHD4Q6ZW05 846 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 SDR9C7Q8NEX9 313 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 OR4K13Q8NH42 304 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 KISS1RQ969F8 398 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-224ENST00000483359 TMEM54Q969K7 222 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 KCNK17Q96T54 332 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 C9orf16Q9BUW7 83 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 MRPL13Q9BYD1 178 aaKnown RBP15.7■□□□□ 0.1
CPNE1-224ENST00000483359 DCLRE1BQ9H816 532 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 GPR35Q9HC97 309 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 TAS2R16Q9NYV7 291 aa15.7■□□□□ 0.1
CPNE1-224ENST00000483359 A6NIZ1 184 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 CNOT4O95628 575 aaKnown RBP15.69■□□□□ 0.1
CPNE1-224ENST00000483359 QDPRP09417 244 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 COX5AP20674 150 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 PEX2P28328 305 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 RAP1BP61224 184 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 RAP1AP62834 184 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 DAG1Q14118 895 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 SFRP5Q5T4F7 317 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 TMEM236Q5W0B7 351 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 FAM205BPQ63HN1 556 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 GPR139Q6DWJ6 353 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 DNAJC9Q8WXX5 260 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 SLC29A1Q99808 456 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 B3GAT2Q9NPZ5 323 aa15.69■□□□□ 0.1
CPNE1-224ENST00000483359 STX18Q9P2W9 335 aaKnown RBP15.69■□□□□ 0.1
CPNE1-224ENST00000483359 KLF2Q9Y5W3 355 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms