RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 LSM11P83369 360 aaKnown RBP eCLIP16.3■□□□□ 0.27e-6■□□□□ 8.5
HSPG2-210ENST00000481644 SAMD4BQ5PRF9 694 aaKnown RBP16.3■□□□□ 0.2
HSPG2-210ENST00000481644 GKAP1Q5VSY0 366 aaPredicted RBP16.3■□□□□ 0.2
HSPG2-210ENST00000481644 C16orf89Q6UX73 402 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 HDDC2Q7Z4H3 204 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 MDP1Q86V88 176 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 NRMQ8IXM6 262 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 MOSPD2Q8NHP6 518 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 ACOT11Q8WXI4 607 aaPredicted RBP16.3■□□□□ 0.2
HSPG2-210ENST00000481644 C18orf12Q96KH6 178 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 CDRT15Q96T59 188 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 CBLN4Q9NTU7 201 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 DCAF13Q9NV06 445 aaKnown RBP16.3■□□□□ 0.2
HSPG2-210ENST00000481644 NDE1Q9NXR1 346 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 VPS13CQ709C8 3753 aa16.3■□□□□ 0.2
HSPG2-210ENST00000481644 FAM107AO95990 144 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 HLA-HP01893 362 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 CELA3BP08861 270 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 TSPAN19P0C672 248 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 SAGP10523 405 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-210ENST00000481644 CD79AP11912 226 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 ARR3P36575 388 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 IDH3GP51553 393 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-210ENST00000481644 CLRN1P58418 232 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 NAAAQ02083 359 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 NPRL3Q12980 569 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 LAPTM4AQ15012 233 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 ZNF730Q6ZMV8 503 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 NOXO1Q8NFA2 376 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 ASB10Q8WXI3 467 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 NANOS1Q8WY41 292 aaKnown RBP16.29■□□□□ 0.2
HSPG2-210ENST00000481644 BDH2Q9BUT1 245 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 GORASP2Q9H8Y8 452 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 SEC61A2Q9H9S3 476 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 MAGEL2Q9UJ55 1249 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 HIF3AQ9Y2N7 669 aa16.29■□□□□ 0.2
HSPG2-210ENST00000481644 FAM32AQ9Y421 112 aaKnown RBP16.29■□□□□ 0.2
HSPG2-210ENST00000481644 MAP1AP78559 2803 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-210ENST00000481644 FLNAP21333 2647 aaKnown RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 A0A087WUU8 490 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 QDPRP09417 244 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 MAKP20794 623 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 APOBEC3AP31941 199 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 MNAT1P51948 309 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 PRKCDQ05655 676 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 RUNX1T1Q06455 604 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 KRT72Q14CN4 511 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 FXNQ16595 210 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 GSG1Q2KHT4 349 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 ALG10Q5BKT4 473 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 LRFN4Q6PJG9 635 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 RRM2BQ7LG56 351 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 TSEN54Q7Z6J9 526 aaKnown RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 MYPOPQ86VE0 399 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 MEX3DQ86XN8 651 aaKnown RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 CDK20Q8IZL9 346 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 RNF113BQ8IZP6 322 aaKnown RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 FITM2Q8N6M3 262 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 FAM86B1Q8N7N1 296 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 CACNG6Q9BXT2 260 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 ANKRD19PQ9H560 264 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 NMNAT1Q9HAN9 279 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 STX18Q9P2W9 335 aaKnown RBP16.28■□□□□ 0.2
HSPG2-210ENST00000481644 CD300AQ9UGN4 299 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 V9GYQ6 96 aa16.28■□□□□ 0.2
HSPG2-210ENST00000481644 TRIM64A6NGJ6 449 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 TRIM64BA6NI03 449 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 EFCAB9A8MZ26 197 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 H7C1Q1 480 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 hCG_2039718K7EN88 272 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 DHHO43323 396 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 INHBBP09529 407 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 ACADSP16219 412 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 CALCRP30988 508 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 MSX2P35548 267 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-210ENST00000481644 ETFDHQ16134 617 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 TBPL2Q6SJ96 375 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 MBOAT2Q6ZWT7 520 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 PIWIL3Q7Z3Z3 882 aaKnown RBP16.27■□□□□ 0.2
HSPG2-210ENST00000481644 SYT14Q8NB59 555 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 CCDC197Q8NCU1 140 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 B3GNT2Q9NY97 397 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.2
HSPG2-210ENST00000481644 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-210ENST00000481644 ACANP16112 2415 aa16.27■□□□□ 0.19
HSPG2-210ENST00000481644 TRAV27A0A087WT01 109 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 NPIPB13A6NJU9 1138 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 CENPBD1B2RD01 187 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 NPIPB4C9JG80 1138 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 ARPC2O15144 300 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 NDUFS7O75251 213 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 ENTPD5O75356 428 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 TRMUO75648 421 aaKnown RBP16.26■□□□□ 0.19
HSPG2-210ENST00000481644 IGHV4-39P01824 125 aa16.26■□□□□ 0.19
HSPG2-210ENST00000481644 H1F0P07305 194 aaKnown RBP16.26■□□□□ 0.19
HSPG2-210ENST00000481644 RHCEP18577 417 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms