RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 NXPE2Q96DL1 559 aa13.09□□□□□ -0.31
PKNOX1-206ENST00000480179 SPRY4Q9C004 299 aa13.09□□□□□ -0.31
PKNOX1-206ENST00000480179 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
PKNOX1-206ENST00000480179 ALKBH4Q9NXW9 302 aa13.09□□□□□ -0.31
PKNOX1-206ENST00000480179 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
PKNOX1-206ENST00000480179 IQCMA0A1B0GVH7 501 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 MAGEB3O15480 346 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 PLPP2O43688 288 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 AKR7A3O95154 331 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 EDNRAP25101 427 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 DLSTP36957 453 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 IFITM3Q01628 133 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 HSF2Q03933 536 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SSPNQ14714 243 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CDK5R1Q15078 307 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 RGS21Q2M5E4 152 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ZNF468Q5VIY5 522 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 B3GNTL1Q67FW5 361 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 C3orf33Q6P1S2 294 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 TUBA3EQ6PEY2 450 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 PLCZ1Q86YW0 608 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 LAX1Q8IWV1 398 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 TIGD4Q8IY51 512 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 PARP16Q8N5Y8 322 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ESX1Q8N693 406 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SCAIQ8N9R8 606 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 OR13C5Q8NGS8 318 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 JSRP1Q96MG2 331 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 POTEKPQ9BYX7 375 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 P4HTMQ9NXG6 502 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ANKRD10Q9NXR5 420 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 POLHQ9Y253 713 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 FREM2Q5SZK8 3169 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SLC16A7O60669 478 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 OR8G3PP0DMU2 310 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 IFNGR1P15260 489 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ZNF12P17014 697 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CD53P19397 219 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 GALP22466 123 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 F8A1P23610 371 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SHC1P29353 583 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 TNFSF8P32971 234 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SFTPDP35247 375 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 EIF3IQ13347 325 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 TRAM1Q15629 374 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 FAM27D1Q5T7N8 215 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ABHD4Q8TB40 342 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ASB10Q8WXI3 467 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 GHSRQ92847 366 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 FRMD6Q96NE9 622 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 OR5B2Q96R09 309 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 UBL7Q96S82 380 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 INTS14Q96SY0 518 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ANGPTL4Q9BY76 406 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 WDR76Q9H967 626 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 ABCB10Q9NRK6 738 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 CMAHPQ9Y471 501 aa13.08□□□□□ -0.32
PKNOX1-206ENST00000480179 A0A1W2PNR3 127 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 OGG1O15527 345 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 TBX1O43435 398 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 SULT1C4O75897 302 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 HLA-DQA2P01906 255 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 PSKH1P11801 424 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 ICAM2P13598 275 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 OR2B6P58173 313 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 SIRPAP78324 504 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 ZNF45Q02386 682 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 ZP4Q12836 540 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 FAM220AQ7Z4H9 259 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 DND1Q8IYX4 353 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 CENPSQ8N2Z9 138 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 FAM83FQ8NEG4 500 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 PAQR8Q8TEZ7 354 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 SNX18Q96RF0 628 aa13.07□□□□□ -0.32
PKNOX1-206ENST00000480179 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms