RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 NPEPL1Q8NDH3 523 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR51S1Q8NGJ8 323 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ZFYVE21Q9BQ24 234 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 DTX4Q9Y2E6 619 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 KLHDC2Q9Y2U9 406 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 UBE2QL1A1L167 161 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 SULT1B1O43704 296 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 GLSO94925 669 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 SPI1P17947 270 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 CTHP32929 405 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 CAPZA2P47755 286 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 Q6ZSR6 202 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR9A4Q8NGU2 314 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR10AC1Q8NH08 325 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR8S1Q8NH09 359 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 TNFAIP8L1Q8WVP5 186 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ATOH1Q92858 354 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF426Q9BUY5 554 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 GPR75O95800 540 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 ACAA2P42765 397 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 C11orf88Q6PI97 169 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 SLC22A18ASQ8N1D0 253 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 CLRN3Q8NCR9 226 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 OR51A4Q8NGJ6 313 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 OR10K1Q8NGX5 313 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 PCOLCE2Q9UKZ9 415 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 MPDZO75970 2070 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 ARID1BQ8NFD5 2236 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 TRAV14DV4A0A0A6YYC5 116 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 GPRIN2O60269 458 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 RAB40ALP0C0E4 278 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 RPL4P36578 427 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 ERVK-25P63136 954 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 CA13Q8N1Q1 262 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 PXT1Q8NFP0 134 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 RAB40AQ8WXH6 277 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 TCF7L1Q9HCS4 588 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 CPNE7Q9UBL6 633 aa12.11□□□□□ -0.47
PDZRN3-208ENST00000479530 BRINP1O60477 761 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF254O75437 659 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 LTBQ06643 244 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 DNM1P46Q6ZS02 220 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CAMKVQ8NCB2 501 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 RPS4Y2Q8TD47 263 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 PELOQ9BRX2 385 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 BARX1Q9HBU1 254 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 FRRS1LQ9P0K9 344 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CLEC1BQ9P126 229 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ENTPD2Q9Y5L3 495 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 TMEM72A0PK05 275 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 H7C417 338 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 RBBP9O75884 186 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 NDUFB2O95178 105 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 WDPCPO95876 746 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CD1AP06126 327 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CALCBP10092 127 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 RAB3AP20336 220 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 MAP3K8P41279 467 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 LBX1P52954 281 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 IGSF11Q5DX21 431 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF684Q5T5D7 378 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ABHD13Q7L211 337 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CSNK1A1LQ8N752 337 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 RERGQ96A58 199 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 ULBP3Q9BZM4 244 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 HPF1Q9NWY4 346 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 MTFP1Q9UDX5 166 aa12.1□□□□□ -0.47
PDZRN3-208ENST00000479530 CD3DP04234 171 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 HNRNPA2B1P22626 353 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 PSG6Q00889 435 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 LINC01590Q5TEZ4 76 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 OTPQ5XKR4 325 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 CDRT4Q8N9R6 151 aa12.09□□□□□ -0.47
PDZRN3-208ENST00000479530 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms