RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZNF721Q8TF20 911 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 ADIPOR1Q96A54 375 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 ZNF285Q96NJ3 590 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 OR11A1Q9GZK7 315 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 RANBP3Q9H6Z4 567 aaPredicted RBP9.79□□□□□ -0.84
VPS52-217ENST00000478934 COL6A3P12111 3177 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 KIF26BQ2KJY2 2108 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 I3L521 148 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 AIPO00170 330 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 RGS11O94810 467 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 ABHD16AO95870 558 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SULT1A3P0DMM9 295 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SULT1A4P0DMN0 295 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 FOLR1P15328 257 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
VPS52-217ENST00000478934 IL11P20809 199 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 PPICP45877 212 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 PTH2RP49190 550 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 ELOCQ15369 112 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SLC35D3Q5M8T2 416 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 TMEM69Q5SWH9 247 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 LRRN1Q6UXK5 716 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 LANCL3Q6ZV70 420 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SLC16A9Q7RTY1 509 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 TMPRSS12Q86WS5 348 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 GLB1L2Q8IW92 636 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SLC35F3Q8IY50 421 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SLC38A6Q8IZM9 456 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 OR5AK2Q8NH90 309 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 OR1L3Q8NH93 324 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 GPX7Q96SL4 187 aaPredicted RBP9.79□□□□□ -0.84
VPS52-217ENST00000478934 TAS2R5Q9NYW4 299 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 ZNF69Q9UC07 566 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 PRODH2Q9UF12 536 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 LAMP5Q9UJQ1 280 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 GTF2A1LQ9UNN4 478 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 PCDHGA5Q9Y5G8 931 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 FKBP7Q9Y680 259 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 RNF215Q9Y6U7 377 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 V9GY05 133 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 CNTRLQ7Z7A1 2325 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 A0A1W2PR77 199 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 SMAD9O15198 467 aaKnown RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 CDC40O60508 579 aaKnown RBP eCLIP9.78□□□□□ -0.84
VPS52-217ENST00000478934 SIX6O95475 246 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 ALDOBP05062 364 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 HOXD11P31277 338 aaPredicted RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 EFNB2P52799 333 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 BLVRAP53004 296 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 DMWDQ09019 674 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 C19orf57Q0VDD7 668 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 ALKBH1Q13686 389 aaKnown RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 NSDHLQ15738 373 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 PWWP2BQ6NUJ5 590 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 CHMP1BQ7LBR1 199 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 OR4D10Q8NGI6 311 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 OR56B4Q8NH76 319 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 THAP3Q8WTV1 239 aaPredicted RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 LCORQ96JN0 433 aaPredicted RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 SLC22A13Q9Y226 551 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 MED12Q93074 2177 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 MEIKINA0A087WXM9 373 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 H3BMH7 237 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 PEX14O75381 377 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 MPZL1O95297 269 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 HLA-DQA2P01906 255 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 TPOP07202 933 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 GUSBP08236 651 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 PNMTP11086 282 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 ARPC4P59998 168 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 TSPAN5P62079 268 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 SNTA1Q13424 505 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 ESCO2Q56NI9 601 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 MAMSTRQ6ZN01 415 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 BIVMQ86UB2 503 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 CDC20BQ86Y33 519 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 WDFY1Q8IWB7 410 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 CCDC28AQ8IWP9 274 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 DUSP15Q9H1R2 295 aaPredicted RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 ZNF576Q9H609 170 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 TCF7L1Q9HCS4 588 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 MYEF2Q9P2K5 600 aaKnown RBP9.78□□□□□ -0.84
VPS52-217ENST00000478934 FOXJ3Q9UPW0 622 aa9.78□□□□□ -0.84
VPS52-217ENST00000478934 TLCD2A6NGC4 264 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 POM121CA8CG34 1229 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.85
VPS52-217ENST00000478934 RORAP35398 523 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 P2RX1P51575 399 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SKP1P63208 163 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MELKQ14680 651 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 ANGPT1Q15389 498 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SMUG1Q53HV7 270 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 LRRTM1Q86UE6 522 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 OR2G2Q8NGZ5 317 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 RPS4Y2Q8TD47 263 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms