RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GPR35Q9HC97 309 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 B3GAT2Q9NPZ5 323 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 RASSF1Q9NS23 344 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 ZNF346Q9UL40 294 aaKnown RBP23.54■■□□□ 1.36
CCM2-211ENST00000478582 MGAT4BQ9UQ53 548 aa23.54■■□□□ 1.36
CCM2-211ENST00000478582 CIB4A0PJX0 185 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 A6NNC1 897 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 ACADSP16219 412 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 CSNK1A1P48729 337 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 IST1P53990 364 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 ROR2Q01974 943 aaKnown RBP23.53■■□□□ 1.36
CCM2-211ENST00000478582 STK11Q15831 433 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 HIST3H3Q16695 136 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 FAM205BPQ63HN1 556 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 HMBOX1Q6NT76 420 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 SMARCD3Q6STE5 483 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 TMEM179BQ7Z7N9 219 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 IGFN1Q86VF2 1251 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 OR10G2Q8NGC3 310 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 OR6N1Q8NGY5 312 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 GIPC3Q8TF64 312 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 HSD17B8Q92506 261 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 POLDIP3Q9BY77 421 aaKnown RBP23.53■■□□□ 1.36
CCM2-211ENST00000478582 NRIP3Q9NQ35 241 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 GLTPQ9NZD2 209 aa23.53■■□□□ 1.36
CCM2-211ENST00000478582 M0R3G1 203 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 IGHG1P01857 330 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 THBDP07204 575 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 RPL4P36578 427 aaKnown RBP23.52■■□□□ 1.36
CCM2-211ENST00000478582 SH3BGRP55822 239 aaPredicted RBP23.52■■□□□ 1.36
CCM2-211ENST00000478582 ATP6AP1Q15904 470 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 RFX4Q33E94 735 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 TIMM23BQ5SRD1 257 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 C1QTNF12Q5T7M4 302 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 THSD4Q6ZMP0 1018 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 SSX8Q7RTT4 187 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 C10orf67Q8IYJ2 551 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 C17orf78Q8N4C9 275 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 AQP11Q8NBQ7 271 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 ZNF519Q8TB69 540 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 NRBF2Q96F24 287 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 KATNB1Q9BVA0 655 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 DENND2DQ9H6A0 471 aaPredicted RBP23.52■■□□□ 1.36
CCM2-211ENST00000478582 CRLF2Q9HC73 371 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 ZNF226Q9NYT6 803 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 ITGB1BP2Q9UKP3 347 aa23.52■■□□□ 1.36
CCM2-211ENST00000478582 OR5H1A6NKK0 313 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 E2F6O75461 281 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 TRMUO75648 421 aaKnown RBP23.51■■□□□ 1.35
CCM2-211ENST00000478582 RAD51DO75771 328 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 GOSR1O95249 250 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 FCGR1AP12314 374 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 FASP25445 335 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 RUNX1T1Q06455 604 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 C9orf135Q5VTT2 229 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 CD300LDQ6UXZ3 194 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 DPY19L2P2Q6ZN68 376 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 FAM122BQ7Z309 247 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 TSPAN32Q96QS1 320 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 OR52D1Q9H346 318 aa23.51■■□□□ 1.35
CCM2-211ENST00000478582 CASKO14936 926 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 APEHP13798 732 aaKnown RBP23.5■■□□□ 1.35
CCM2-211ENST00000478582 GSTM3P21266 225 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 CRYGSP22914 178 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 ERVK-25P63136 954 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 CEACAM16Q2WEN9 425 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 RPL13AP3Q6NVV1 102 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 LRFN4Q6PJG9 635 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 ZNF620Q6ZNG0 422 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 RASSF6Q6ZTQ3 369 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 ARIH2OSQ8N7S6 290 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 NOXO1Q8NFA2 376 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 OR1K1Q8NGR3 316 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 FANK1Q8TC84 345 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 HDAC2Q92769 488 aaKnown RBP23.5■■□□□ 1.35
CCM2-211ENST00000478582 KCNK17Q96T54 332 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 FEVQ99581 238 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 ULBP2Q9BZM5 246 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 CLEC4MQ9H2X3 399 aaPredicted RBP23.5■■□□□ 1.35
CCM2-211ENST00000478582 PDP1Q9P0J1 537 aaPredicted RBP23.5■■□□□ 1.35
CCM2-211ENST00000478582 GRHPRQ9UBQ7 328 aa23.5■■□□□ 1.35
CCM2-211ENST00000478582 A6NIZ1 184 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ACVR1BP36896 505 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ARHGDIAP52565 204 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ZNF133P52736 654 aaPredicted RBP23.49■■□□□ 1.35
CCM2-211ENST00000478582 CLRN1P58418 232 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 RAP1BP61224 184 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 RAP1AP62834 184 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 COX10Q12887 443 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 TOP3AQ13472 1001 aaPredicted RBP23.49■■□□□ 1.35
CCM2-211ENST00000478582 TAB1Q15750 504 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 GPR139Q6DWJ6 353 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ZFP1Q6P2D0 407 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 SHQ1Q6PI26 577 aaKnown RBP23.49■■□□□ 1.35
CCM2-211ENST00000478582 ZNF627Q7L945 461 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 CLDN22Q8N7P3 220 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 MAGEE2Q8TD90 523 aaPredicted RBP23.49■■□□□ 1.35
CCM2-211ENST00000478582 ZNF837Q96EG3 531 aaPredicted RBP23.49■■□□□ 1.35
CCM2-211ENST00000478582 BDH2Q9BUT1 245 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ALG12Q9BV10 488 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms