RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SPOPLQ6IQ16 392 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 PAMR1Q6UXH9 720 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 KIAA1328Q86T90 577 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 ARHGAP18Q8N392 663 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 GPR137CQ8N3F9 429 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 KLHL30-AS1Q8NEE0 82 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR10A7Q8NGE5 316 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRMT10AQ8TBZ6 339 aaKnown RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF606Q8WXB4 792 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 CTNNBL1Q8WYA6 563 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 RPL3LQ92901 407 aaKnown RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 C12orf66Q96MD2 445 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 SIGLEC12Q96PQ1 595 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR5M11Q96RB7 305 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 MED10Q9BTT4 135 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 PAXXQ9BUH6 204 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 GORASP2Q9H8Y8 452 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 RAB20Q9NX57 234 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 C6orf203Q9P0P8 240 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 SPRR3Q9UBC9 169 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 HMGXB4Q9UGU5 601 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF221Q9UK13 617 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 LSM7Q9UK45 103 aaKnown RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 SCML2Q9UQR0 700 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 RASD1Q9Y272 281 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 COL27A1Q8IZC6 1860 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 PLXNB3Q9ULL4 1909 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 DMXL1Q9Y485 3027 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 USP34Q70CQ2 3546 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 C15orf38-AP3S2A0A0A6YYH1 394 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 FRG2CA6NGY1 282 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 KLLNB2CW77 178 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 COCHO43405 550 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CACNG3O60359 315 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 TPST2O60704 377 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SCRG1O75711 98 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 DCNP07585 359 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC35E2P0CK97 266 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 HNF1AP20823 631 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 FASP25445 335 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 PTBP1P26599 531 aaKnown RBP eCLIP2.99□□□□□ -1.932e-17■■■□□ 15.5
CDC42BPA-212ENST00000478573 ADORA2BP29275 332 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 IL2RGP31785 369 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 OPRD1P41143 372 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 LIM2P55344 173 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 ACTR1AP61163 376 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CD47Q08722 323 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 ST3GAL3Q11203 375 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 IL24Q13007 206 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 PON2Q15165 354 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 PAN3Q58A45 887 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SDHAF4Q5VUM1 108 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 RGS9BPQ6ZS82 235 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 MOB3BQ86TA1 216 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 ACOT1Q86TX2 421 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 MCOLN2Q8IZK6 566 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF557Q8N988 423 aaPredicted RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR2T33Q8NG76 320 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC2A14Q8TDB8 520 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 NELFBQ8WX92 580 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CNOT6LQ96LI5 555 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 AMDHD1Q96NU7 426 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR5B2Q96R09 309 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 P2RY13Q9BPV8 354 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRIM62Q9BVG3 475 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CLSTN2Q9H4D0 955 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 MIEF1Q9NQG6 463 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CISHQ9NSE2 258 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 FAM49BQ9NUQ9 324 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SMPD3Q9NY59 655 aaPredicted RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 PIPOXQ9P0Z9 390 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 TBK1Q9UHD2 729 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 RSPH14Q9UHP6 348 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 RWDD2AQ9UIY3 292 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 RAB23Q9ULC3 237 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 KIAA1257Q9ULG3 409 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 MMP17Q9ULZ9 603 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 NDRG2Q9UN36 371 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCL26Q9Y258 94 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 NAALAD2Q9Y3Q0 740 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 MAD1L1Q9Y6D9 718 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 EP300Q09472 2414 aaPredicted RBP2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 SDK1Q7Z5N4 2213 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CABIN1Q9Y6J0 2220 aa2.99□□□□□ -1.93
CDC42BPA-212ENST00000478573 CNOT1A5YKK6 2376 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 PTPRZ1P23471 2315 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 PIKFYVEQ9Y2I7 2098 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 IGHV2-70DA0A0C4DH43 119 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 LOC100131303A0A0U1RQF7 123 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 KIF2AO00139 706 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 MED7O43513 233 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 THY1P04216 161 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 APODP05090 189 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 DUX4L4P0CJ87 422 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 ATP5C1P36542 298 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 HPCAL1P37235 193 aa2.98□□□□□ -1.93
CDC42BPA-212ENST00000478573 MDH2P40926 338 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms