RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 CSMD1Q96PZ7 3565 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CRYBG3Q68DQ2 2970 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 A0A0G2JND7 137 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 UBA6A0AVT1 1052 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 HMX2A2RU54 273 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 NKX6-3A6NJ46 265 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FAM171A2A8MVW0 826 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 C5orf58C9J3I9 102 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 E7ENX8 843 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 F8WDY8 70 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ARPC3O15145 178 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TGOLN2O43493 480 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ADAM20O43506 726 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RGS14O43566 566 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 XPNPEP2O43895 674 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ORC5O43913 435 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SRPX2O60687 465 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 WDR47O94967 919 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 AP2A2O94973 939 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CBX7O95931 251 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CD2P06729 351 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR8U8P0C7N1 319 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 C1GALT1C1LP0DN25 315 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ARSBP15848 533 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 MAKP20794 623 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 UQCRFS1P47985 274 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PLA2G16P53816 162 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SCAND1P57086 179 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SELENOTP62341 195 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 DCDP81605 110 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 DEFA5Q01523 94 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OLIG2Q13516 323 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 BOP1Q14137 746 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FASTKQ14296 549 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ABRAXAS2Q15018 415 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PTGES3Q15185 160 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TAF9Q16594 264 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 NRF1Q16656 503 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CYP1B1Q16678 543 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 UGT8Q16880 541 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PTCHD3Q3KNS1 767 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TFDP3Q5H9I0 405 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TBCELQ5QJ74 424 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PHYHD1Q5SRE7 291 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FNBP1LQ5T0N5 605 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TSTD2Q5T7W7 516 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR2G6Q5TZ20 316 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FAM69BQ5VUD6 431 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 METRNLQ641Q3 311 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 LAMTOR1Q6IAA8 161 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 TMEM220Q6QAJ8 160 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 VHLLQ6RSH7 139 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SCIMPQ6UWF3 145 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RNF111Q6ZNA4 994 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 DET1Q7L5Y6 550 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 WDFY1Q8IWB7 410 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 PGAM4Q8N0Y7 254 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 D2HGDHQ8N465 521 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 LILRA3Q8N6C8 439 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SIDT2Q8NBJ9 832 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SLC38A9Q8NBW4 561 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ZBTB34Q8NCN2 500 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR10W1Q8NGF6 305 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR51L1Q8NGJ5 315 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR9Q1Q8NGQ5 310 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR11L1Q8NGX0 322 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR10R2Q8NGX6 335 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR8U1Q8NH10 309 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CD200R1Q8TD46 325 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SCARB1Q8WTV0 552 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RNF133Q8WVZ7 376 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 WFDC12Q8WWY7 111 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 C11orf40Q8WZ69 217 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RGP1Q92546 391 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 HGDQ93099 445 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ERGIC1Q969X5 290 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ZNF501Q96CX3 271 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ARSGQ96EG1 525 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 ZC3HAV1LQ96H79 300 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FER1L6-AS2Q96M78 137 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 OR2V2Q96R30 315 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 INSM2Q96T92 566 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CD180Q99467 661 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 EPYCQ99645 322 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 NRTNQ99748 197 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 CMSS1Q9BQ75 279 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 FSD1LQ9BXM9 530 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RTN4RQ9BZR6 473 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 SLC38A1Q9H2H9 487 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 EPB41L4BQ9H329 900 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RHOFQ9HBH0 211 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 EML4Q9HC35 981 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
TRA2B-211ENST00000477939 GAR1Q9NY12 217 aaKnown RBP5.39□□□□□ -1.55
TRA2B-211ENST00000477939 RASL12Q9NYN1 266 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms