RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TSPAN31Q12999 210 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 EIF2B1Q14232 305 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 GNMTQ14749 295 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TRAM2Q15035 370 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SF3A2Q15428 464 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TNXAQ16473 311 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 DUSP5Q16690 384 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 EXOC3L4Q17RC7 722 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PGGHGQ32M88 737 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 COX19Q49B96 90 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RFTN2Q52LD8 501 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 EIPR1Q53HC9 387 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PIGGQ5H8A4 983 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 LY6G6FQ5SQ64 297 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CEP85LQ5SZL2 805 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 IDNKQ5T6J7 187 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SEL1L2Q5TEA6 688 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR2G6Q5TZ20 316 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 THOC7Q6I9Y2 204 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ADNP2Q6IQ32 1131 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ATRAIDQ6UW56 229 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PARM1Q6UWI2 310 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 APOBEC3FQ8IUX4 373 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF786Q8N393 782 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MTURNQ8N3F0 131 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 IQCF1Q8N6M8 205 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NOXO1Q8NFA2 376 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR10V1Q8NGI7 309 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR1J1Q8NGS3 322 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR52E5Q8NH55 327 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR5AK3PQ8NH89 298 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 LYPD6BQ8NI32 183 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 HPSE2Q8WWQ2 592 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 HSD17B8Q92506 261 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MRPS31Q92665 395 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MRPL24Q96A35 216 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 APH1AQ96BI3 265 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RTP4Q96DX8 246 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TMA16Q96EY4 203 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ZBED6CLQ96FA7 236 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CENPNQ96H22 339 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ITCHQ96J02 903 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RITA1Q96K30 269 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CEP19Q96LK0 163 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OR5B2Q96R09 309 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TAAR1Q96RJ0 339 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TNFRSF13CQ96RJ3 184 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RANBP9Q96S59 729 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 LPAR4Q99677 370 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CIB1Q99828 191 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 HSD17B14Q9BPX1 270 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SH2D3AQ9BRG2 576 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CCDC28BQ9BUN5 200 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 UCK2Q9BZX2 261 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ELOVL4Q9GZR5 314 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 LAT2Q9GZY6 243 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PORCNQ9H237 461 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CXXC4Q9H2H0 198 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 C1orf198Q9H425 327 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 EBF3Q9H4W6 596 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MAP6D1Q9H9H5 199 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SLC25A19Q9HC21 320 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NRN1Q9NPD7 142 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MRPL40Q9NQ50 206 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PRSS16Q9NQE7 514 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 C8orf4Q9NR00 106 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SDR39U1Q9NRG7 319 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 C1orf109Q9NX04 203 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TEX10Q9NXF1 929 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ZNHIT2Q9UHR6 403 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 STOML2Q9UJZ1 356 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NXT1Q9UKK6 140 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 COPS3Q9UNS2 423 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SCML2Q9UQR0 700 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SLC17A4Q9Y2C5 497 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 AK6Q9Y3D8 172 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OARD1Q9Y530 152 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 POLR3HQ9Y535 204 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TECTAO75443 2155 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SLX4Q8IY92 1834 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OTOGQ6ZRI0 2925 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CKAP5Q14008 2032 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MON2Q7Z3U7 1717 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 DOT1LQ8TEK3 1739 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PIK3C2GO75747 1445 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MYO9BQ13459 2157 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 IGHV2-70DA0A0C4DH43 119 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 BCLAF3A2AJT9 711 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PSMB11A5LHX3 300 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SLC22A20A6NK97 555 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF195O14628 629 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 GOSR2O14653 212 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 HAT1O14929 419 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TM9SF1O15321 606 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RGS16O15492 202 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 B4GAT1O43505 415 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SOX15O60248 233 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 EIF4E2O60573 245 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 FZD7O75084 574 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms