RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZNF619Q8N2I2 560 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR11H7Q8NGC8 314 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR11H4Q8NGC9 324 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR4D10Q8NGI6 311 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR2AJ1Q8NGZ0 328 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SETD7Q8WTS6 366 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ARHGAP9Q9BRR9 750 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GDE1Q9NZC3 331 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 MRTO4Q9UKD2 239 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FAM221BA6H8Z2 402 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TNFRSF10AO00220 468 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FADS1O60427 444 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RP2O75695 350 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CYB5AP00167 134 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 HLA-AP01891 365 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CD3DP04234 171 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CEACAM5P06731 702 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GABRG2P18507 467 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OMGP23515 440 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 UGT2B10P36537 528 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 MRPL19P49406 292 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SRYQ05066 204 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PLA2G7Q13093 441 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GALEQ14376 348 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OPCMLQ14982 345 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 DECR1Q16698 335 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GLYATL3Q5SZD4 288 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 MPP7Q5T2T1 576 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM184AQ6ZMB5 413 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GID4Q8IVV7 300 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR13C3Q8NGS6 347 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CD300LFQ8TDQ1 290 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF566Q969W8 418 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FBXO17Q96EF6 278 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ITGB1BP2Q9UKP3 347 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CLEC3AO75596 197 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TRAPPC6AO75865 159 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RLN2P04090 185 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF16P17020 682 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 HSD11B1P28845 292 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 AVPR2P30518 371 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 DRD3P35462 400 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RFC3P40938 356 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 P2RX3P56373 397 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FUT5Q11128 374 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TOMM34Q15785 309 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 HBMQ6B0K9 141 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 C3orf33Q6P1S2 294 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 NIPAL3Q6P499 406 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 KLHL24Q6TFL4 600 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 C3P1Q6ZMU1 363 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 IDO2Q6ZQW0 420 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 KCTD20Q7Z5Y7 419 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 LRRTM1Q86UE6 522 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CMIPQ8IY22 773 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TTLQ8NG68 377 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR10R2Q8NGX6 335 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PTP4A1Q93096 173 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 MOGAT1Q96PD6 335 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RSPO3Q9BXY4 272 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SELENOIQ9C0D9 397 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PRO3102Q9H379 93 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 MED11Q9P086 117 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 KLHL13Q9P2N7 655 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF230Q9UIE0 474 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 DHDHQ9UQ10 334 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 V9GY05 133 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 A0A087WV62 115 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 A0A1W2PNR3 127 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 KANTRA0A1W2PQU2 76 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 A0A1W2PR80 420 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NPIPA5E9PKD4 350 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF593O00488 134 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PDCD5O14737 125 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NUDT21O43809 227 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ALX3O95076 343 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZFPL1O95159 310 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 RAB3DO95716 219 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CPEP16870 476 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SRMP19623 302 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ENPP1P22413 925 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 RPS4XP62701 263 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 REEP5Q00765 189 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SMAD4Q13485 552 aaKnown RBP4.55□□□□□ -1.68
CCDC39-204ENST00000476379 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ARTNQ5T4W7 220 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 EEF1A1P5Q5VTE0 462 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM225Q6GV28 225 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PYHIN1Q6K0P9 492 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM91Q6ZNR0 172 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 NR2C2APQ86WQ0 139 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF227Q86WZ6 799 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 SUMF1Q8NBK3 374 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 WFIKKN2Q8TEU8 576 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 RADILQ96JH8 1075 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LYSMD1Q96S90 227 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 GABARAPL1Q9H0R8 117 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 CHRDQ9H2X0 955 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 LHX9Q9NQ69 397 aa4.55□□□□□ -1.68
CCDC39-204ENST00000476379 PRDM7Q9NQW5 492 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms