RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TEKQ02763 1124 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 PUDPQ08623 228 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 ACKR1Q16570 336 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 HYAL4Q2M3T9 481 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 LINC00303Q3SY05 128 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 RPL13AP3Q6NVV1 102 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 TMEM53Q6P2H8 277 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 FAM109AQ8N4B1 249 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 SLC37A3Q8NCC5 494 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 ANKK1Q8NFD2 765 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 OR51V1Q9H2C8 321 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 EXO5Q9H790 373 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 ALKBH4Q9NXW9 302 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 MRPS18CQ9Y3D5 142 aaKnown RBP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 OR6C68A6NDL8 312 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 IFNGR1P15260 489 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 CD36P16671 472 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 POU3F1Q03052 451 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 CD300CQ08708 224 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 TBCEQ15813 527 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 MESTQ5EB52 335 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 HBMQ6B0K9 141 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 C5orf46Q6UWT4 87 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 Q6ZS92 163 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 OR10D3Q8NH80 312 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 GGHQ92820 318 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 NXF2Q9GZY0 626 aaKnown RBP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 CMC2Q9NRP2 79 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 LHX6Q9UPM6 363 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 HDGFL3Q9Y3E1 203 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 NPIPA5E9PKD4 350 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 FADS2O95864 444 aaKnown RBP16.16■□□□□ 0.18
ATG4B-217ENST00000475693 C21orf33P30042 268 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-217ENST00000475693 GRK5P34947 590 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 MAP2K6P52564 334 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 CLDN18P56856 261 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 CARD18P57730 90 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF404Q494X3 552 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 KLHL12Q53G59 568 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 LYPD4Q6UWN0 246 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 ASB18Q6ZVZ8 466 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 CXXC5Q7LFL8 322 aaKnown RBP16.16■□□□□ 0.18
ATG4B-217ENST00000475693 FAM26EQ8N5C1 309 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 MCFD2Q8NI22 146 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 CHAC2Q8WUX2 184 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 HPS1Q92902 700 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 ADGRG7Q96K78 797 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 FOXN4Q96NZ1 517 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 RERGLQ9H628 205 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 CLN6Q9NWW5 311 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 TAS2R16Q9NYV7 291 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 GRHPRQ9UBQ7 328 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 NPIPA1Q9UND3 350 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 RELNP78509 3460 aa16.16■□□□□ 0.18
ATG4B-217ENST00000475693 DCTN6O00399 190 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 ARHGEF9O43307 516 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 HMGN1P05114 100 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 KRR1Q13601 381 aaKnown RBP16.15■□□□□ 0.18
ATG4B-217ENST00000475693 TMEM225Q6GV28 225 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 LEG1Q6P5S2 330 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 NPEPL1Q8NDH3 523 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 TM9SF4Q92544 642 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 GPX7Q96SL4 187 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-217ENST00000475693 ZDHHC11Q9H8X9 412 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 METTL15A6NJ78 407 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 KDM4EB2RXH2 506 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-217ENST00000475693 ACOT7O00154 380 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 GPANK1O95872 356 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 SLC16A1P53985 500 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 LSM3P62310 102 aaKnown RBP16.15■□□□□ 0.18
ATG4B-217ENST00000475693 AADACL4Q5VUY2 407 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 SYT14Q8NB59 555 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 DCSTAMPQ9H295 470 aa16.15■□□□□ 0.18
ATG4B-217ENST00000475693 PKD1L2Q7Z442 2459 aa16.14■□□□□ 0.18
ATG4B-217ENST00000475693 TRGV5A0A0B4J1U4 118 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 RIIAD1A6NNX1 92 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 PMS2P2O95744 297 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 PTTG1O95997 202 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 STSP08842 583 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 ACVR1BP36896 505 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 SLC35A1P78382 337 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 ZNF45Q02386 682 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 USP43Q70EL4 1123 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 LYSMD2Q8IV50 215 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 NEIL3Q8TAT5 605 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 DDOQ99489 341 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 TIMP4Q99727 224 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 SRA1Q9HD15 236 aaKnown RBP16.14■□□□□ 0.17
ATG4B-217ENST00000475693 RPRD1BQ9NQG5 326 aaKnown RBP16.14■□□□□ 0.17
ATG4B-217ENST00000475693 ASB6Q9NWX5 421 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 TRAPPC4Q9Y296 219 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 CDK2AP1O14519 115 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 SMAD9O15198 467 aaKnown RBP16.14■□□□□ 0.17
ATG4B-217ENST00000475693 SDHAP31040 664 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 CLK1P49759 484 aaKnown RBP16.14■□□□□ 0.17
ATG4B-217ENST00000475693 H3F3AP84243 136 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 ARHGAP11AQ6P4F7 1023 aa16.14■□□□□ 0.17
ATG4B-217ENST00000475693 C19orf48Q6RUI8 117 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms