RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 MUS81Q96NY9 551 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
TRAIP-204ENST00000473863 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 DDOQ99489 341 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 MRPL13Q9BYD1 178 aaKnown RBP11.87□□□□□ -0.51
TRAIP-204ENST00000473863 MED29Q9NX70 200 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 TVP23BQ9NYZ1 205 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
TRAIP-204ENST00000473863 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 OR6C65A6NJZ3 312 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 KDM4EB2RXH2 506 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-204ENST00000473863 M0R3G1 203 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ZNHIT1O43257 154 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 PRKYO43930 277 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 SERPINI2O75830 405 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 CLIC3O95833 236 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 YES1P07947 543 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ACVR1BP36896 505 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-204ENST00000473863 SLC25A1P53007 311 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 BIDP55957 195 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 CLDN17P56750 224 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 CRMP1Q14194 572 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 MELKQ14680 651 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 MEDAGQ5VYS4 303 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 SEM1Q6ZVN7 128 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 PTCHD4Q6ZW05 846 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 MCEMP1Q8IX19 187 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 C9orf106Q8NAJ2 232 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 SLC37A3Q8NCC5 494 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 SDR9C7Q8NEX9 313 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 HDAC2Q92769 488 aaKnown RBP11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ZNF566Q969W8 418 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 LRR1Q96L50 414 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 OR2M2Q96R28 347 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 NMNAT2Q9BZQ4 307 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 PARPBPQ9NWS1 579 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ZNF226Q9NYT6 803 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 FOXD3Q9UJU5 478 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-204ENST00000473863 LRCH1Q9Y2L9 728 aa11.86□□□□□ -0.51
TRAIP-204ENST00000473863 ALPK2Q86TB3 2170 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 SLC35F4A4IF30 521 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 SLC2A10O95528 541 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 CEACAM8P31997 349 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 CDKN2AP42771 156 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 CA7P43166 264 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 IL5RAQ01344 420 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 CD47Q08722 323 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 MED21Q13503 144 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 STK11Q15831 433 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 OCLNQ16625 522 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 SLC35F1Q5T1Q4 408 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 RIPPLY2Q5TAB7 128 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 AADACL4Q5VUY2 407 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 NXNL2Q5VZ03 156 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 FAM214BQ7L5A3 538 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 GID4Q8IVV7 300 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 TCEANCQ8N8B7 351 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 OR52E2Q8NGJ4 325 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 OR6K3Q8NGY3 331 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 APH1BQ8WW43 257 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 INTS12Q96CB8 462 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 LINC00470Q9BZP3 86 aa11.85□□□□□ -0.51
TRAIP-204ENST00000473863 HINT3Q9NQE9 182 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 NOSIPQ9Y314 301 aaKnown RBP11.85□□□□□ -0.51
TRAIP-204ENST00000473863 ITPR3Q14573 2671 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 SLC22A23A1A5C7 686 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 OR6C68A6NDL8 312 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 ZNF726A6NNF4 738 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 E9PLN8 166 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 M0R129 80 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 PRODHO43272 600 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 ARHGEF9O43307 516 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 TLX2O43763 284 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 SLC43A1O75387 559 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 RENP00797 406 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 STSP08842 583 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 SLC2A5P22732 501 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 SELENOPP49908 381 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 CASP6P55212 293 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 RUNX1T1Q06455 604 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 ITGADQ13349 1161 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 KRT80Q6KB66 452 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 NIPAL3Q6P499 406 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 PLXDC2Q6UX71 529 aa11.84□□□□□ -0.51
TRAIP-204ENST00000473863 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
TRAIP-204ENST00000473863 AAED1Q7RTV5 226 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms