RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 BOD1Q96IK1 185 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 MRPL13Q9BYD1 178 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 GABARAPL1Q9H0R8 117 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF556Q9HAH1 456 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 GLTPQ9NZD2 209 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 GRHPRQ9UBQ7 328 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 NDRG3Q9UGV2 375 aa16.72■□□□□ 0.27
CTDSP1-207ENST00000473420 TUBAL3A6NHL2 446 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ANKRD65E5RJM6 399 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 G3V2T6 193 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 IMPA2O14732 288 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ARPC3O15145 178 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 TRMUO75648 421 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 LYZL6O75951 148 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 TXNDC12O95881 172 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF23P17027 643 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 IL32P24001 234 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 SDHAP31040 664 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ACVR1BP36896 505 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 CLRN1P58418 232 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ERVK-25P63136 954 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ROR2Q01974 943 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 TGFBR3Q03167 851 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 LGALS3BPQ08380 585 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 TOP3AQ13472 1001 aaPredicted RBP16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 OR7E24Q6IFN5 339 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 LINGO2Q7L985 606 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ZDHHC13Q8IUH4 622 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ARIH2OSQ8N7S6 290 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 OR52L1Q8NGH7 329 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ZNF570Q96NI8 536 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 KCNK17Q96T54 332 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 PKP2Q99959 881 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ALG12Q9BV10 488 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ULBP2Q9BZM5 246 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 GPR35Q9HC97 309 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ADAM18Q9Y3Q7 739 aa16.71■□□□□ 0.27
CTDSP1-207ENST00000473420 ALPK2Q86TB3 2170 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 M0R3G1 203 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 IDH3BO43837 385 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 AHCYL1O43865 530 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 PRKACGP22612 351 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 FOXG1P55316 489 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 RUNX1T1Q06455 604 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 PHYHD1Q5SRE7 291 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 C1QTNF12Q5T7M4 302 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 FAHD1Q6P587 224 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 KLHL17Q6TDP4 642 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 SSX8Q7RTT4 187 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 C17orf78Q8N4C9 275 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 ATG16L2Q8NAA4 619 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 MAGEE2Q8TD90 523 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 HDAC2Q92769 488 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 SAMD8Q96LT4 415 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 DACH2Q96NX9 599 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 OSBPL10Q9BXB5 764 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 ACTR6Q9GZN1 396 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 SEMA6AQ9H2E6 1030 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 EGLN3Q9H6Z9 239 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 CRLF2Q9HC73 371 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 KIF17Q9P2E2 1029 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 IL20RAQ9UHF4 553 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 IER3IP1Q9Y5U9 82 aa16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 MAGED1Q9Y5V3 778 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-207ENST00000473420 CIB4A0PJX0 185 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 SH3D21A4FU49 640 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 XKRYO14609 159 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 TP53P04637 393 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 COX6B1P14854 86 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 KIR2DL3P43628 341 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 ZNF133P52736 654 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 GABRA6Q16445 453 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 CEACAM16Q2WEN9 425 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 MESTQ5EB52 335 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 ADCK1Q86TW2 530 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 P2RY8Q86VZ1 359 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 FAM222BQ8WU58 562 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 S100PBPQ96BU1 408 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 Q96M85 177 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 MUS81Q96NY9 551 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 IFT27Q9BW83 186 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 PLA2G12AQ9BZM1 189 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 SMURF2Q9HAU4 748 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 REV1Q9UBZ9 1251 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 KCNN3Q9UGI6 736 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 BAIAP2Q9UQB8 552 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 POFUT2Q9Y2G5 429 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 ADGRG4Q8IZF6 3080 aa16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 ANKHD1Q8IWZ3 2542 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-207ENST00000473420 TEX13CA0A0J9YWL9 993 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 ZNF99A8MXY4 864 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 BHLHE40O14503 412 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 RAD51DO75771 328 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 PPP1R3DO95685 299 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 OSMP13725 252 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 KRR1Q13601 381 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 TSC22D1Q15714 1073 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 TIMM23BQ5SRD1 257 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 C10orf128Q5T292 105 aa16.68■□□□□ 0.26
CTDSP1-207ENST00000473420 ZNF627Q7L945 461 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms