RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TFP02787 698 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 OR8G3PP0DMU2 310 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 KRT80Q6KB66 452 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.54
CHD3-209ENST00000473376 C10orf111Q8N326 155 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 TXNDC15Q96J42 360 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 MCHR1Q99705 422 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 EBF4Q9BQW3 602 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 CPPED1Q9BRF8 314 aaPredicted RBP11.65□□□□□ -0.54
CHD3-209ENST00000473376 SOX7Q9BT81 388 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 MRPL37Q9BZE1 423 aaKnown RBP11.65□□□□□ -0.54
CHD3-209ENST00000473376 IKZF5Q9H5V7 419 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 MRGBPQ9NV56 204 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 MED29Q9NX70 200 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 NKIRAS2Q9NYR9 191 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 GLTPQ9NZD2 209 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 LEF1Q9UJU2 399 aaPredicted RBP11.65□□□□□ -0.54
CHD3-209ENST00000473376 LRP5LA4QPB2 252 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 HTR3EA5X5Y0 456 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 FARS2O95363 451 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 ADORA3P0DMS8 318 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 B4GALT1P15291 398 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 AHCYP23526 432 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 GIPRP48546 466 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 AQP5P55064 265 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 SELENOVP59797 346 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 ZNF74Q16587 644 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 MOGQ16653 247 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 HIST3H3Q16695 136 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 DUSP7Q16829 419 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 PCGF3Q3KNV8 242 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 AGKQ53H12 422 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 ELFN2Q5R3F8 820 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 INTS11Q5TA45 600 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 GKAP1Q5VSY0 366 aaPredicted RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 METTL21CQ5VZV1 264 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 TTC33Q6PID6 262 aaPredicted RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 PTOV1Q86YD1 416 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 SLC22A24Q8N4F4 322 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 ZNF566Q969W8 418 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 SEPHS2Q99611 448 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 SIKE1Q9BRV8 207 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 ZNF416Q9BWM5 594 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 POLR2J2Q9GZM3 115 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 POLR2J3Q9H1A7 115 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 NANSQ9NR45 359 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.64□□□□□ -0.55
CHD3-209ENST00000473376 TRIM33Q9UPN9 1127 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 NDUFAF1Q9Y375 327 aa11.64□□□□□ -0.55
CHD3-209ENST00000473376 SVEP1Q4LDE5 3571 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 IGLV3-9A0A075B6K5 115 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 TRAPPC13A5PLN9 417 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 NPIPB13A6NJU9 1138 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 NPIPB4C9JG80 1138 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 M0QX08 132 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ASAH2BP0C7U1 165 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ANPEPP15144 967 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ZNF250P15622 560 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 CBLP22681 906 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ZNF133P52736 654 aaPredicted RBP11.63□□□□□ -0.55
CHD3-209ENST00000473376 BIDP55957 195 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 PIGFQ07326 219 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SLC36A2Q495M3 483 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 CARD17Q5XLA6 110 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SLC35D2Q76EJ3 337 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 GLCCI1Q86VQ1 547 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ZNF584Q8IVC4 421 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SKA3Q8IX90 412 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ZCCHC24Q8N2G6 241 aaKnown RBP11.63□□□□□ -0.55
CHD3-209ENST00000473376 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 OR1J2Q8NGS2 313 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 ADAMTS16Q8TE57 1224 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SNX18Q96RF0 628 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 CGREF1Q99674 301 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 BCL2L14Q9BZR8 327 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 LRMDAQ9H2I8 198 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 KAT8Q9H7Z6 458 aaKnown RBP11.63□□□□□ -0.55
CHD3-209ENST00000473376 TMEM38BQ9NVV0 291 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SLCO1C1Q9NYB5 712 aa11.63□□□□□ -0.55
CHD3-209ENST00000473376 SH3PXD2BA1X283 911 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 DHHO43323 396 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 LYPD3O95274 346 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 IGHG1P01857 330 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 HIST1H2ABP04908 130 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 PGA3P0DJD8 388 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 AQP1P29972 269 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 IL2RGP31785 369 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 RBM34P42696 430 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms