RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TNK1Q13470 666 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 TRAM2Q15035 370 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 VHLLQ6RSH7 139 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 CBLL1Q75N03 491 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-226ENST00000473066 IL17RDQ8NFM7 739 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 FBXO17Q96EF6 278 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 HSH2DQ96JZ2 352 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 SMR3AQ99954 134 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 INIPQ9NRY2 104 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 GMPR2Q9P2T1 348 aaKnown RBP13.57□□□□□ -0.24
MRPL55-226ENST00000473066 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-226ENST00000473066 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 FBXL3Q9UKT7 428 aa13.57□□□□□ -0.24
MRPL55-226ENST00000473066 H7C417 338 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 SSX4O60224 188 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 DCTN3O75935 186 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 PDE5AO76074 875 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 UBL3O95164 117 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 HLA-HP01893 362 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 F13BP05160 661 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 SAGP10523 405 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-226ENST00000473066 NR2C1P13056 603 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF84P51523 738 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 C8orf82Q6P1X6 216 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-226ENST00000473066 CLEC2AQ6UVW9 174 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-226ENST00000473066 RRM2BQ7LG56 351 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 TMEM54Q969K7 222 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 RHNO1Q9BSD3 238 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 NDEL1Q9GZM8 345 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 CA10Q9NS85 328 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 C20orf141Q9NUB4 165 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 ABCD2Q9UBJ2 740 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 FKBP7Q9Y680 259 aa13.56□□□□□ -0.24
MRPL55-226ENST00000473066 DHHO43323 396 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 PIP5K1CO60331 668 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 NDUFS7O75251 213 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 CELA3BP08861 270 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 NCK1P16333 377 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 AQP2P41181 271 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 MXRA7P84157 204 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF627Q7L945 461 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 PIWIL3Q7Z3Z3 882 aaKnown RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 CDK20Q8IZL9 346 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 BPIFA2Q96DR5 249 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 DENND2DQ9H6A0 471 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 SEC61A2Q9H9S3 476 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 RHCGQ9UBD6 479 aa13.55□□□□□ -0.24
MRPL55-226ENST00000473066 FBXO9Q9UK97 447 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 FAM32AQ9Y421 112 aaKnown RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-226ENST00000473066 IGHV2OR16-5A0A0B4J2B6 119 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 CENPBD1B2RD01 187 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 RNF223E7ERA6 249 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 LY6G6DO95868 133 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 QDPRP09417 244 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 CSF3P09919 207 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 OR8G3PP0DMU2 310 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 CALCRP30988 508 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 SERPINF1P36955 418 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 PTDSS1P48651 473 aaKnown RBP13.54□□□□□ -0.24
MRPL55-226ENST00000473066 GYS2P54840 703 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 DSCR9P59020 149 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 PIGFQ07326 219 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 SNTB2Q13425 540 aaKnown RBP13.54□□□□□ -0.24
MRPL55-226ENST00000473066 TOP3AQ13472 1001 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 NRMQ8IXM6 262 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 NUP37Q8NFH4 326 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 LIPHQ8WWY8 451 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ACOT11Q8WXI4 607 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-226ENST00000473066 LRRC37BQ96QE4 947 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF442Q9H7R0 627 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 NDE1Q9NXR1 346 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 EGFL7Q9UHF1 273 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 SPEF1Q9Y4P9 236 aa13.54□□□□□ -0.24
MRPL55-226ENST00000473066 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF503-AS2A6NEH8 195 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 NPIPB13A6NJU9 1138 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 EFCAB9A8MZ26 197 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 B9A039 149 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 J3KTA2 159 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TP53P04637 393 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-226ENST00000473066 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-226ENST00000473066 OR4A8P0C604 315 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 ACADSP16219 412 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 RAB1AP62820 205 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 PPP2R2BQ00005 443 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms