RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PHYHD1Q5SRE7 291 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 DPY19L2P2Q6ZN68 376 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 IGFN1Q86VF2 1251 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 AQP11Q8NBQ7 271 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 OR9Q2Q8NGE9 314 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 GIPC3Q8TF64 312 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 KATNB1Q9BVA0 655 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 POLDIP3Q9BY77 421 aaKnown RBP18.26■□□□□ 0.51
TOP3A-204ENST00000472959 ULBP2Q9BZM5 246 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 NGBQ9NPG2 151 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF346Q9UL40 294 aaKnown RBP18.26■□□□□ 0.51
TOP3A-204ENST00000472959 MGAT4BQ9UQ53 548 aa18.26■□□□□ 0.51
TOP3A-204ENST00000472959 TIPRLO75663 272 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 FCGR1AP12314 374 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 NR2C1P13056 603 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 CDH2P19022 906 aaPredicted RBP18.25■□□□□ 0.51
TOP3A-204ENST00000472959 GSTM3P21266 225 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 ARHGDIAP52565 204 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 ERVK-25P63136 954 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 TLE4Q04727 773 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 TOP3AQ13472 1001 aaPredicted RBP18.25■□□□□ 0.51
TOP3A-204ENST00000472959 HIST3H3Q16695 136 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 CEACAM16Q2WEN9 425 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 RFX4Q33E94 735 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 GPR139Q6DWJ6 353 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 RPL13AP3Q6NVV1 102 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 ANKRD16Q6P6B7 361 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 ARIH2OSQ8N7S6 290 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 OR10G2Q8NGC3 310 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 OR1K1Q8NGR3 316 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 FANK1Q8TC84 345 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 TSPAN32Q96QS1 320 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 ALG12Q9BV10 488 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 DGCR6LQ9BY27 220 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 NRIP3Q9NQ35 241 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 GRHPRQ9UBQ7 328 aa18.25■□□□□ 0.51
TOP3A-204ENST00000472959 FAM221AA4D161 298 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF99A8MXY4 864 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 TRMUO75648 421 aaKnown RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 APEHP13798 732 aaKnown RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 HOXB1P14653 301 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 HOXC12P31275 282 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 SLC6A6P31641 620 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ACVR1BP36896 505 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 IST1P53990 364 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 FXYD6P3P58550 94 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ARF1P84077 181 aaKnown RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 RUNX1T1Q06455 604 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 KPNB1Q14974 876 aaKnown RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 PPA1Q15181 289 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ATP6AP1Q15904 470 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 LRFN4Q6PJG9 635 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 WFDC8Q8IUA0 241 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 NOXO1Q8NFA2 376 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF519Q8TB69 540 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 FNDC8Q8TC99 324 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 MAGEE2Q8TD90 523 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 BCL2L2Q92843 193 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-204ENST00000472959 NRBF2Q96F24 287 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 OR52D1Q9H346 318 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 OBP2BQ9NPH6 170 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 SLC17A5Q9NRA2 495 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 POFUT2Q9Y2G5 429 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 AMDHD2Q9Y303 409 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 ALPK2Q86TB3 2170 aa18.24■□□□□ 0.51
TOP3A-204ENST00000472959 NAV2Q8IVL1 2488 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 AHCYL1O43865 530 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 CTAG2O75638 210 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 QDPRP09417 244 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 PAX7P23759 505 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 FASP25445 335 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 RPS6KA3P51812 740 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 COX10Q12887 443 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 ZSCAN26Q16670 478 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 KLHL24Q6TFL4 600 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 CD300LDQ6UXZ3 194 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 THSD4Q6ZMP0 1018 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF620Q6ZNG0 422 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 RASSF6Q6ZTQ3 369 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF627Q7L945 461 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 FAM122BQ7Z309 247 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 SYT14Q8NB59 555 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 HDAC2Q92769 488 aaKnown RBP18.23■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF837Q96EG3 531 aaPredicted RBP18.23■□□□□ 0.51
TOP3A-204ENST00000472959 KCNK17Q96T54 332 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 BDH2Q9BUT1 245 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 SMURF2Q9HAU4 748 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 NTN4Q9HB63 628 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 RASSF1Q9NS23 344 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 PDP1Q9P0J1 537 aaPredicted RBP18.23■□□□□ 0.51
TOP3A-204ENST00000472959 ADAM18Q9Y3Q7 739 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 SLC25A15Q9Y619 301 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 CDH10Q9Y6N8 788 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 UNC79Q9P2D8 2635 aa18.23■□□□□ 0.51
TOP3A-204ENST00000472959 DEFB108AA8MXU0 73 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 XKRYO14609 159 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 PRF1P14222 555 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 SDHAP31040 664 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF133P52736 654 aaPredicted RBP18.22■□□□□ 0.51
TOP3A-204ENST00000472959 TBRG1Q3YBR2 411 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms