RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GIFP27352 417 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 CSNK1A1P48729 337 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 EVX1P49640 407 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 RAB1AP62820 205 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SNTB2Q13425 540 aaKnown RBP13.2□□□□□ -0.3
VTI1A-203ENST00000472892 CYLC2Q14093 348 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-203ENST00000472892 CARTPTQ16568 116 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 KRT80Q6KB66 452 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SLC35D2Q76EJ3 337 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 PIWIL3Q7Z3Z3 882 aaKnown RBP13.2□□□□□ -0.3
VTI1A-203ENST00000472892 ZCCHC24Q8N2G6 241 aaKnown RBP13.2□□□□□ -0.3
VTI1A-203ENST00000472892 LRRC17Q8N6Y2 441 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 PRSS27Q9BQR3 290 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 NANSQ9NR45 359 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 LPAR3Q9UBY5 353 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF229Q9UJW7 825 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SLC7A7Q9UM01 511 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 CMAHPQ9Y471 501 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SPEF1Q9Y4P9 236 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 APEHP13798 732 aaKnown RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 DAOP14920 347 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF16P17020 682 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF23P17027 643 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 GIPRP48546 466 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 IQCCQ4KMZ1 466 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 LRFN4Q6PJG9 635 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 CALHM3Q86XJ0 350 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 SKA3Q8IX90 412 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF786Q8N393 782 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 LRRC58Q96CX6 371 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 SLC25A44Q96H78 314 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 BPESC1Q9GZL8 116 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
VTI1A-203ENST00000472892 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-203ENST00000472892 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 RNF13O43567 381 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 UBL3O95164 117 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 NPPAP01160 153 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 HIST1H2ABP04908 130 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 ADRA2AP08913 450 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 THBS2P35442 1172 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 GLRXP35754 106 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 PTDSS1P48651 473 aaKnown RBP13.18□□□□□ -0.3
VTI1A-203ENST00000472892 FXNQ16595 210 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 RABL3Q5HYI8 236 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 COQ5Q5HYK3 327 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 HIST3H2AQ7L7L0 130 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 SLC22A24Q8N4F4 322 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 HIST1H2ACQ93077 130 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 MRPL24Q96A35 216 aaKnown RBP13.18□□□□□ -0.3
VTI1A-203ENST00000472892 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
VTI1A-203ENST00000472892 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-203ENST00000472892 MRGBPQ9NV56 204 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 FBXL3Q9UKT7 428 aa13.18□□□□□ -0.3
VTI1A-203ENST00000472892 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 FXYD1O00168 92 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-203ENST00000472892 SYNGR3O43761 229 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 SASH3O75995 380 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 RAB36O95755 333 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 BCL10O95999 233 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 SERPINA5P05154 406 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 TACSTD2P09758 323 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 OR8G3PP0DMU2 310 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 IGFBP5P24593 272 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 RAB39AQ14964 217 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 CARM1Q86X55 608 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 POLR2J2Q9GZM3 115 aaKnown RBP13.17□□□□□ -0.3
VTI1A-203ENST00000472892 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
VTI1A-203ENST00000472892 DYNLRB1Q9NP97 96 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 TMEM38BQ9NVV0 291 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 BAG5Q9UL15 447 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
VTI1A-203ENST00000472892 SH3GLB1Q9Y371 365 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms