RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RIN1Q13671 783 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 CCNIQ14094 377 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ZNF74Q16587 644 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 IQCCQ4KMZ1 466 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SPRNQ5BIV9 151 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ELFN2Q5R3F8 820 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 OTPQ5XKR4 325 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 FAM91A1Q658Y4 838 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 NANOGP8Q6NSW7 305 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SLC35D2Q76EJ3 337 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ABHD12BQ7Z5M8 362 aaPredicted RBP6.94□□□□□ -1.3
USP48-207ENST00000471752 NET1Q7Z628 596 aaPredicted RBP6.94□□□□□ -1.3
USP48-207ENST00000471752 PXKQ7Z7A4 578 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 CALHM3Q86XJ0 350 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 FAM169BQ8N8A8 192 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SYT14Q8NB59 555 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ADPRHL1Q8NDY3 354 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 PIK3C3Q8NEB9 887 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 OR6N1Q8NGY5 312 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 OR5J2Q8NH18 312 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ADAMTS16Q8TE57 1224 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 TMEM255BQ8WV15 326 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SNX18Q96RF0 628 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ZNF347Q96SE7 839 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ZNF607Q96SK3 696 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ARMC7Q9H6L4 198 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 NANOGQ9H9S0 305 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 POFUT2Q9Y2G5 429 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 NDUFAF1Q9Y375 327 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SNX13Q9Y5W8 968 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 LOC390937A0A1W2PQ73 354 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ZNF726A6NNF4 738 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 EVPLLA8MZ36 301 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 FAM157AC9JC47 383 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 EDF1O60869 148 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 F13BP05160 661 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 QDPRP09417 244 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 FAM157BP0CG42 384 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 GIFP27352 417 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 CDAP32320 146 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ARR3P36575 388 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 AQP2P41181 271 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 MAGEB1P43366 347 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 YAP1P46937 504 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 CSNK1A1P48729 337 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 PPOXP50336 477 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 FMODQ06828 376 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 PIN1Q13526 163 aaPredicted RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 NFYCQ13952 458 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 FXNQ16595 210 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 CYP51A1Q16850 503 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 GSG1Q2KHT4 349 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 CR1LQ2VPA4 569 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 C3orf36Q3SXR2 165 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 PODNL1Q6PEZ8 512 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ZNF627Q7L945 461 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 KRT73Q86Y46 540 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 C11orf65Q8NCR3 313 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 CPEB3Q8NE35 698 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 OR4F15Q8NGB8 312 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 OR6S1Q8NH40 331 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 MRPL24Q96A35 216 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 LRR1Q96L50 414 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 MAGEB18Q96M61 343 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ZNF583Q96ND8 569 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 FOXB1Q99853 325 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 KCNS3Q9BQ31 491 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 PIMREGQ9BSJ6 248 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 TMEM43Q9BTV4 400 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ZNF426Q9BUY5 554 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 TMEM120AQ9BXJ8 343 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ASPNQ9BXN1 380 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ULBP2Q9BZM5 246 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 SHARPINQ9H0F6 387 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 ZNF442Q9H7R0 627 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 LPAR2Q9HBW0 351 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 INTS9Q9NV88 658 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 TREM2Q9NZC2 230 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 GLTPQ9NZD2 209 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 TESQ9UGI8 421 aaKnown RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 LEF1Q9UJU2 399 aaPredicted RBP6.93□□□□□ -1.3
USP48-207ENST00000471752 PRDM4Q9UKN5 801 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 NOX1Q9Y5S8 564 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 CACNG2Q9Y698 323 aa6.93□□□□□ -1.3
USP48-207ENST00000471752 LOC100653049A0A140TA62 436 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 PRORSD1PA6NEY8 169 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 BLOC1S5-TXNDC5H3BN57 136 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 LCE2BO14633 110 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 IMPA2O14732 288 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 DHHO43323 396 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 RNF13O43567 381 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 CHP2O43745 196 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 SERPINB7O75635 380 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 RGS9O75916 674 aaPredicted RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 KRT34O76011 436 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 SLC2A10O95528 541 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 AVPP01185 164 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 ASAH2BP0C7U1 165 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms