RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ZNF627Q7L945 461 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 SPATA21Q7Z572 469 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 OR8J3Q8NGG0 315 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 TMEM255BQ8WV15 326 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 TMEM54Q969K7 222 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF583Q96ND8 569 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 FOXB1Q99853 325 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 ECSITQ9BQ95 431 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 B3GAT2Q9NPZ5 323 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 NANSQ9NR45 359 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 ARMCX1Q9P291 453 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 FKBP7Q9Y680 259 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 IGHV4-61A0A0C4DH41 118 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 SH3PXD2BA1X283 911 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 OR6A2O95222 327 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 ASAH2BP0C7U1 165 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 UMPSP11172 480 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 USF1P22415 310 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-203ENST00000471344 GIPRP48546 466 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 PDLIM4P50479 330 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 DAG1Q14118 895 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 MMEL1Q495T6 779 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 LRFN4Q6PJG9 635 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 HIPK1Q86Z02 1210 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 SKA3Q8IX90 412 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 PROX1Q92786 737 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 FOXN4Q96NZ1 517 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 DOK1Q99704 481 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF442Q9H7R0 627 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 C20orf141Q9NUB4 165 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 GLTPQ9NZD2 209 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF229Q9UJW7 825 aa13.26□□□□□ -0.29
COL1A1-203ENST00000471344 PIP5K1CO60331 668 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 F13BP05160 661 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 CSF3P09919 207 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 PGA4P0DJD7 388 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 PGA3P0DJD8 388 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 FUT1P19526 365 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 NPR2P20594 1047 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 NR4A2P43354 598 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 PPOXP50336 477 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 TAS2R41P59536 307 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 RPL18Q07020 188 aaKnown RBP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 ZP4Q12836 540 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 PIN1Q13526 163 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 RAB39AQ14964 217 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF584Q8IVC4 421 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 ARIH2OSQ8N7S6 290 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 OR6X1Q8NH79 312 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 RCN3Q96D15 328 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 PIMREGQ9BSJ6 248 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 TPK1Q9H3S4 243 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 MOV10Q9HCE1 1003 aaKnown RBP13.25□□□□□ -0.29
COL1A1-203ENST00000471344 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
COL1A1-203ENST00000471344 MALRD1Q5VYJ5 2156 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 BLOC1S5-TXNDC5H3BN57 136 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 NPPAP01160 153 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF35P13682 527 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 DRD4P21917 467 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 NR4A1P22736 598 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 AQP2P41181 271 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 RAB1AP62820 205 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 LRP11Q86VZ4 500 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 MEX3DQ86XN8 651 aaKnown RBP13.24□□□□□ -0.29
COL1A1-203ENST00000471344 CCDC36Q8IYA8 594 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 MOSPD2Q8NHP6 518 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 SLC25A44Q96H78 314 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF347Q96SE7 839 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 SOX7Q9BT81 388 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 SLC19A3Q9BZV2 496 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 BPESC1Q9GZL8 116 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 CMTM6Q9NX76 183 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 MYEF2Q9P2K5 600 aaKnown RBP13.24□□□□□ -0.29
COL1A1-203ENST00000471344 RIMS3Q9UJD0 308 aa13.24□□□□□ -0.29
COL1A1-203ENST00000471344 FAM220BPB1ANY3 271 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 LYNX1G3V0Z9 82 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 OR7A10O76100 309 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 OR5F1O95221 314 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 RAB36O95755 333 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 MT-ND1P03886 318 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 ADRA2AP08913 450 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 LYNX1P0DP58 116 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 LSP1P33241 339 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 MAD2L1BPQ15013 274 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-203ENST00000471344 IL17RELQ6ZVW7 336 aa13.23□□□□□ -0.29
COL1A1-203ENST00000471344 SLC22A24Q8N4F4 322 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms