RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PDE10AQ9Y233 779 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PCYT1BQ9Y5K3 369 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 HEBP2Q9Y5Z4 205 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CACNA1HO95180 2353 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 FANCMQ8IYD8 2048 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 MUC3AQ02505 3323 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 GMNCA6NCL1 334 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CFAP73A6NFT4 308 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 A8MT66 165 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PDZK1P1A8MUH7 402 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM114B3SHH9 223 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SUPT3HB4E1H0 165 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 UBXN8O00124 270 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CTDSPLO15194 276 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SIGLEC5O15389 551 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PRAF2O60831 178 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SHOX2O60902 331 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ATP6V1G1O75348 118 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SUPT3HO75486 399 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 C1orf105O95561 183 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SERPINE1P05121 402 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 GFAPP14136 432 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ANPEPP15144 967 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 XRCC1P18887 633 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TIA1P31483 386 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ACTR1BP42025 376 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 IER3P46695 156 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ARRB1P49407 418 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ACTR1AP61163 376 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 HERVK_113P63132 956 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 GNGT1P63211 74 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ARHGAP19Q14CB8 494 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CHI3L2Q15782 390 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 Q1RN00 199 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CFAP157Q5JU67 520 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF678Q5SXM1 525 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ATAD3CQ5T2N8 411 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PRAMEF8Q5VWM4 474 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TCEAL6Q6IPX3 200 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SBSNQ6UWP8 590 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CCBE1Q6UXH8 406 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PRSS42Q7Z5A4 293 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TAF8Q7Z7C8 310 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 GKN2Q86XP6 184 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 OR9A1PQ8NGU1 263 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 OR5K2Q8NHB8 316 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SETD7Q8WTS6 366 aaKnown RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 THRSPQ92748 146 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM186Q96B77 213 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 C14orf79Q96F83 325 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 CHMP6Q96FZ7 201 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PDXPQ96GD0 296 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 C12orf66Q96MD2 445 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF317Q96PQ6 595 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TXN2Q99757 166 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SSX3Q99909 188 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ERVK-6Q9BXR3 956 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 DRC3Q9H069 523 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 WWP1Q9H0M0 922 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SLITRK2Q9H156 845 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 C3orf14Q9HBI5 128 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 EML4Q9HC35 981 aaKnown RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 UTP6Q9NYH9 597 aaKnown RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 THYN1Q9P016 225 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 APOBEC3BQ9UH17 382 aaKnown RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 IKZF3Q9UKT9 509 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 PSMD13Q9UNM6 376 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 KCNK6Q9Y257 313 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 ASF1AQ9Y294 204 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 STK38LQ9Y2H1 464 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 SLCO1B1Q9Y6L6 691 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 GOLGA4Q13439 2230 aaKnown RBP4.11□□□□□ -1.75
CCDC39-202ENST00000471307 WDR87Q6ZQQ6 2873 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 LRP4O75096 1905 aa4.11□□□□□ -1.75
CCDC39-202ENST00000471307 TNRC6BQ9UPQ9 1833 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CUL9Q8IWT3 2517 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 A0A1B0GTH9 108 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NCF1BA6NI72 391 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 RPL37AP8A6NKH3 93 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NCF1CA8MVU1 366 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 TCP11X1B4DZS4 312 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 LMO7DNF2Z398 122 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 YKT6O15498 198 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 TAPBPO15533 448 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 AQP9O43315 295 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 GMFGO60234 142 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 EDF1O60869 148 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SNNO75324 88 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 STK16O75716 305 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SUPT7LO94864 414 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 AKR7A3O95154 331 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 IGHG1P01857 330 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OPN1MWP04001 364 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 THY1P04216 161 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 FGF4P08620 206 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OPN1MW2P0DN77 364 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OPN1MW3P0DN78 364 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NCF1P14598 390 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 BGNP21810 368 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms