RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SELENONQ9NZV5 590 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 SLC13A4Q9UKG4 626 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RCE1Q9Y256 329 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 PLCE1Q9P212 2302 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 TRAV36DV7A0A075B6V5 113 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 A0A087WUJ7 227 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 A0A1B0GWA3 101 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 A0A1W2PR80 420 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 EI24O14681 340 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 BMP4P12644 408 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 RPS5P46782 204 aaKnown RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 ADARB1P78563 741 aaKnown RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 HOXC5Q00444 222 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 IL18R1Q13478 541 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 DAG1Q14118 895 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 VEZF1Q14119 521 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 C3orf36Q3SXR2 165 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 RBM48Q5RL73 367 aaKnown RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 TTC23Q5W5X9 447 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 GLYATQ6IB77 296 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 C11orf71Q6IPW1 123 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 NIPAL3Q6P499 406 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 DNM1P46Q6ZS02 220 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 SLC30A8Q8IWU4 369 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 C10orf111Q8N326 155 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 MUC15Q8N387 334 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF786Q8N393 782 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 C11orf65Q8NCR3 313 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 PPP1R14BQ96C90 147 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 SLC25A36Q96CQ1 311 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 KTI12Q96EK9 354 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 EPYCQ99645 322 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 CPPED1Q9BRF8 314 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 IKZF5Q9H5V7 419 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 PCDHGB5Q9Y5G0 923 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 CORINQ9Y5Q5 1042 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
HMGN1-211ENST00000471260 CSPG4Q6UVK1 2322 aa11.81□□□□□ -0.52
HMGN1-211ENST00000471260 HIVEP2P31629 2446 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 ARPC4-TTLL3A0A0A6YYG9 625 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 RPL36A-HNRNPH2H7BZ11 118 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 AKAP8O43823 692 aaKnown RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 FMO6PO60774 539 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 MFN2O95140 757 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 IGHV4-39P01824 125 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 JUNBP17275 347 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 DCKP27707 260 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 HTR2AP28223 471 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 APOBEC3AP31941 199 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 SELENOPP49908 381 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 PCBP3P57721 371 aaKnown RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 RGS8P57771 180 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 DSCR9P59020 149 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 TOP3AQ13472 1001 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 CYBRD1Q53TN4 286 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 H1FNTQ75WM6 255 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 RANBP3LQ86VV4 465 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 ARMC8Q8IUR7 673 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 FAM169BQ8N8A8 192 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 OR2T12Q8NG77 320 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 OR1K1Q8NGR3 316 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 TAAR8Q969N4 342 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 RSPO3Q9BXY4 272 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-211ENST00000471260 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
HMGN1-211ENST00000471260 A0A0B4J2E0 115 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 A0A1B0GX12 115 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 TPST1O60507 370 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 SLC43A1O75387 559 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF432O94892 652 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 LGI1O95970 557 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 THRBP10828 461 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 ACVR1BP36896 505 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 FABP6P51161 128 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 CLDN17P56750 224 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 UBE2NP61088 152 aaKnown RBP11.79□□□□□ -0.52
HMGN1-211ENST00000471260 PPP2R2BQ00005 443 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 SPOCK1Q08629 439 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 C1DQ13901 141 aaKnown RBP11.79□□□□□ -0.52
HMGN1-211ENST00000471260 RAB35Q15286 201 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 OR1Q1Q15612 314 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 TBRG1Q3YBR2 411 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 LRRC23Q53EV4 343 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-211ENST00000471260 ANKRD16Q6P6B7 361 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF773Q6PK81 442 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 SCAIQ8N9R8 606 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 CYGBQ8WWM9 190 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 SLC41A3Q96GZ6 507 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
HMGN1-211ENST00000471260 BCL7BQ9BQE9 202 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 TMEM43Q9BTV4 400 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 RBM4Q9BWF3 364 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms