RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ALDH3A2P51648 485 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 UGT2B15P54855 530 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 CDH11P55287 796 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 RAC3P60763 192 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 SELENBP1Q13228 472 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 DAG1Q14118 895 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 PPA1Q15181 289 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 SEC23BQ15437 767 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 LRRC36Q1X8D7 754 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-206ENST00000471037 C3orf33Q6P1S2 294 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 FAHD1Q6P587 224 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 P2RY8Q86VZ1 359 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 NRMQ8IXM6 262 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 CDK20Q8IZL9 346 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 ATG16L2Q8NAA4 619 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 AQP11Q8NBQ7 271 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 OR10H5Q8NGA6 315 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 OR9Q2Q8NGE9 314 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 PIGXQ8TBF5 258 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 STK35Q8TDR2 534 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 SLC25A43Q8WUT9 341 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-206ENST00000471037 RADILQ96JH8 1075 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 RDH12Q96NR8 316 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 RHNO1Q9BSD3 238 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 DGCR6LQ9BY27 220 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF556Q9HAH1 456 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 SERINC1Q9NRX5 453 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 KLHL9Q9P2J3 617 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 CHRNA9Q9UGM1 479 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 CDC42EP3Q9UKI2 254 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 B3GALT5Q9Y2C3 310 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 TMED7Q9Y3B3 224 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 ORC6Q9Y5N6 252 aa7.98□□□□□ -1.13
SF3A1-206ENST00000471037 IGKV1D-42A0A075B6H8 117 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 IGHV4-30-2A0A087WSY4 118 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 A8MVM7 634 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 H0YJX3 145 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 SOCS2O14508 198 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PHF1O43189 567 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 GPRIN2O60269 458 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 RAMP1O60894 148 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 LYZL6O75951 148 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 ALPLP05186 524 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF26P17031 533 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 CDH2P19022 906 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 GSTM3P21266 225 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 ENPP1P22413 925 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PRKACGP22612 351 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 CBLP22681 906 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 FPR3P25089 353 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 OMPP47874 163 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 CLK1P49759 484 aaKnown RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 RAD23AP54725 363 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 DSCR9P59020 149 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PRKCDQ05655 676 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 LOXL1Q08397 574 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 COX10Q12887 443 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM249Q2WGJ8 235 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 RFX4Q33E94 735 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM176BQ3YBM2 270 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TIMM23BQ5SRD1 257 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 AGAP6Q5VW22 663 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 KDM4DQ6B0I6 523 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 C11orf71Q6IPW1 123 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 C1orf94Q6P1W5 598 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PGBD2Q6P3X8 592 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TBPL2Q6SJ96 375 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 CD300LDQ6UXZ3 194 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 ADGRG3Q86Y34 549 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 OR6S1Q8NH40 331 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 MAGEE2Q8TD90 523 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 GNPDA2Q8TDQ7 276 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 DDIT4LQ96D03 193 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 MUCL1Q96DR8 90 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TNFRSF13CQ96RJ3 184 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 FEVQ99581 238 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 SLC29A1Q99808 456 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 SMURF2Q9HAU4 748 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PAPOLBQ9NRJ5 636 aaKnown RBP7.97□□□□□ -1.13
SF3A1-206ENST00000471037 NPAP1Q9NZP6 1156 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 ENOPH1Q9UHY7 261 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 PRSS50Q9UI38 385 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 POFUT2Q9Y2G5 429 aa7.97□□□□□ -1.13
SF3A1-206ENST00000471037 TRAV36DV7A0A075B6V5 113 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 TMEM72A0PK05 275 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 OR5H1A6NKK0 313 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF724A8MTY0 619 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 ABCD4O14678 606 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 SMAD9O15198 467 aaKnown RBP7.96□□□□□ -1.14
SF3A1-206ENST00000471037 SSX4O60224 188 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 PIP5K1CO60331 668 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 CYTIPO60759 359 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 NPIPB7O75200 414 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 AHSA1O95433 338 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 GASTP01350 101 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 IFI30P13284 250 aa7.96□□□□□ -1.14
SF3A1-206ENST00000471037 SLC25A16P16260 332 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms