RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 IFT88Q13099 833 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SLAMF1Q13291 335 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LY6DQ14210 128 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 OPCMLQ14982 345 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 KIAA0040Q15053 153 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LTB4RQ15722 352 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 GGTA1PQ4G0N0 100 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 C6orf136Q5SQH8 315 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 IL23RQ5VWK5 629 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 KHDRBS2Q5VWX1 349 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CST9LP1Q5W188 147 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF343Q6P1L6 599 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 EPGNQ6UW88 154 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 C16orf47Q6ZP98 133 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 RGS9BPQ6ZS82 235 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LANCL3Q6ZV70 420 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CHMP1BQ7LBR1 199 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 KRT74Q7RTS7 529 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 COMMD6Q7Z4G1 85 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CCDC91Q7Z6B0 441 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 GLRX5Q86SX6 157 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LCA5Q86VQ0 697 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ANKRD46Q86W74 232 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CATSPERDQ86XM0 798 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CRLF3Q8IUI8 442 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 TMEM126BQ8IUX1 230 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CLECL1Q8IZS7 167 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CA13Q8N1Q1 262 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 C10orf111Q8N326 155 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LIX1Q8N485 282 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 KLHDC1Q8N7A1 406 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 Q8NBF4 154 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 NT5CQ8TCD5 201 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 PIK3R3Q92569 461 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 C8orf44Q96CB5 159 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 TUBGCP3Q96CW5 907 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CHMP6Q96FZ7 201 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SMIM10Q96HG1 83 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF285Q96NJ3 590 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CCT8L2Q96SF2 557 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 INPP5KQ9BT40 448 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 NMUR2Q9GZQ4 415 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ILKAPQ9H0C8 392 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 EHD1Q9H4M9 534 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 MTHFD2LQ9H903 347 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 MEAF6Q9HAF1 191 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LRTM1Q9HBL6 345 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 DNAJC4Q9NNZ3 241 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ASCL3Q9NQ33 180 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 RPS10P5Q9NQ39 176 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CUTCQ9NTM9 273 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 FBXW2Q9UKT8 454 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ELF5Q9UKW6 265 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SNX7Q9UNH6 387 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 PLCL2Q9UPR0 1127 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CSAG2Q9Y5P2 127 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 AP1M2Q9Y6Q5 423 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 NCKAP5O14513 1909 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 TRABD2BA6NFA1 517 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ANKDD1BA6NHY2 528 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 C17orf51A8MQB3 221 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 TFECO14948 347 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 POLR1CO15160 346 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 HDAC3O15379 428 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CHST10O43529 356 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 GALR3O60755 368 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SEC22BO75396 215 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 STK17BO94768 372 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 GP1BAP07359 652 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 FGF4P08620 206 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CT62P0C5K7 136 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ANKRD34CP0C6C1 535 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 LAMP1P11279 417 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 BCKDHAP12694 445 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 TIA1P31483 386 aaKnown RBP eCLIP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SERPINB5P36952 375 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 HSD17B2P37059 387 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CDKN2CP42773 168 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SSR2P43308 183 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RAD52P43351 418 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CDK9P50750 372 aaKnown RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 LIM2P55344 173 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RPS15AP62244 130 aaKnown RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 DLK1P80370 383 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RASGEF1BQ0VAM2 473 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SELPLGQ14242 412 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 IMPG1Q17R60 797 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 PAGE2BQ5JRK9 111 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CDKL4Q5MAI5 379 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 MLIPQ5VWP3 458 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 LIPJQ5W064 366 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SPINK14Q6IE38 97 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 OR4C11Q6IEV9 310 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 KRT80Q6KB66 452 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 NOXRED1Q6NXP6 359 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 IL17RELQ6ZVW7 336 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms