RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 APEX1P27695 318 aaKnown RBP15.06■□□□□ 0
COL7A1-208ENST00000470076 LSP1P33241 339 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 BIDP55957 195 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 ZP4Q12836 540 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 ENTPD8Q5MY95 495 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 GKAP1Q5VSY0 366 aaPredicted RBP15.06■□□□□ 0
COL7A1-208ENST00000470076 SLC35D2Q76EJ3 337 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 PATL1Q86TB9 770 aaKnown RBP15.06■□□□□ 0
COL7A1-208ENST00000470076 LINC01356Q8N9X3 169 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 GPR32P1Q8NGA4 272 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 OR6T1Q8NGN1 323 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 OR6X1Q8NH79 312 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 TMEM54Q969K7 222 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 SNX18Q96RF0 628 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 CGREF1Q99674 301 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 TPK1Q9H3S4 243 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 GLTPQ9NZD2 209 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 REV1Q9UBZ9 1251 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 NBEAL1Q6ZS30 2694 aa15.06■□□□□ 0
COL7A1-208ENST00000470076 CPSF4LA6NMK7 179 aaKnown RBP15.05■□□□□ -0
COL7A1-208ENST00000470076 OPN1SWP03999 348 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 IL2RGP31785 369 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 MTPNP58546 118 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 NPTX1Q15818 432 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 ZNF74Q16587 644 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 FXNQ16595 210 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 MSMPQ1L6U9 139 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 REP15Q6BDI9 236 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 TTC33Q6PID6 262 aaPredicted RBP15.05■□□□□ -0
COL7A1-208ENST00000470076 ADAMTS16Q8TE57 1224 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 TSPEARQ8WU66 669 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 MPP4Q96JB8 637 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 SLC19A3Q9BZV2 496 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 NANSQ9NR45 359 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 TAS2R5Q9NYW4 299 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 TRIM33Q9UPN9 1127 aa15.05■□□□□ -0
COL7A1-208ENST00000470076 ANK2Q01484 3957 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 TRAPPC13A5PLN9 417 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 CH25HO95992 272 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SERPINA5P05154 406 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 VIMP08670 466 aaKnown RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 OR8G3PP0DMU2 310 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 CDH15P55291 814 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SELPLGQ14242 412 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 RAB39AQ14964 217 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 TTMPQ5BVD1 217 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 INTS11Q5TA45 600 aaKnown RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 LIPNQ5VXI9 398 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 WDR88Q6ZMY6 472 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 RETREG3Q86VR2 466 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SKA3Q8IX90 412 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SLC22A24Q8N4F4 322 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 ZNF566Q969W8 418 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SLC25A44Q96H78 314 aaPredicted RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 C1orf159Q96HA4 380 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 SYT3Q9BQG1 590 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 ZNF385DQ9H6B1 395 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 KAT8Q9H7Z6 458 aaKnown RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 INTS9Q9NV88 658 aaKnown RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 SLC7A8Q9UHI5 535 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 TMEFF2Q9UIK5 374 aaPredicted RBP15.04■□□□□ -0
COL7A1-208ENST00000470076 ZNF229Q9UJW7 825 aa15.04■□□□□ -0
COL7A1-208ENST00000470076 LYNX1G3V0Z9 82 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 RNF13O43567 381 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 LYPD3O95274 346 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 THY1P04216 161 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 HIST1H2ABP04908 130 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 LYNX1P0DP58 116 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 PCMT1P22061 227 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 PCGF2P35227 344 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 NFYCQ13952 458 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 TRIP10Q15642 601 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 HIST3H2AQ7L7L0 130 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 RBM45Q8IUH3 476 aaKnown RBP15.03■□□□□ -0
COL7A1-208ENST00000470076 OR4D11Q8NGI4 311 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 VANGL1Q8TAA9 524 aaPredicted RBP15.03■□□□□ -0
COL7A1-208ENST00000470076 SLC26A7Q8TE54 656 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 RASSF5Q8WWW0 418 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 HIST1H2ACQ93077 130 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 ZNF426Q9BUY5 554 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 PCDHAC1Q9H158 963 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 TMEM38BQ9NVV0 291 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 ZNF346Q9UL40 294 aaKnown RBP15.03■□□□□ -0
COL7A1-208ENST00000470076 SLC7A7Q9UM01 511 aa15.03■□□□□ -0
COL7A1-208ENST00000470076 DHHO43323 396 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 FARS2O95363 451 aaKnown RBP15.02■□□□□ -0
COL7A1-208ENST00000470076 CD247P20963 164 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 ALDH3B1P43353 468 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 ELFN2Q5R3F8 820 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 LRFN4Q6PJG9 635 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 DPPA2Q7Z7J5 298 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 LRP11Q86VZ4 500 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 ZNF584Q8IVC4 421 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 RFLNBQ8N5W9 214 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 LRRC17Q8N6Y2 441 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 FGFBP3Q8TAT2 258 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 RDH5Q92781 318 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 TAMM41Q96BW9 452 aa15.02■□□□□ -0
COL7A1-208ENST00000470076 MAGEB18Q96M61 343 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms