RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 TMEM14AQ9Y6G1 99 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 FITM1A5D6W6 292 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 H0YIG0 161 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 M0R233 179 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SCDO00767 359 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CREBL2O60519 120 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SERPINI2O75830 405 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ALDOBP05062 364 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TMIGD3P0DMS9 266 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CTSEP14091 401 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SOX2P48431 317 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TSPAN5P62079 268 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 RASGEF1BQ0VAM2 473 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 OPCMLQ14982 345 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ANKRD16Q6P6B7 361 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SLC36A1Q7Z2H8 476 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 HDDC2Q7Z4H3 204 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TMPRSS12Q86WS5 348 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 GLB1L2Q8IW92 636 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 PRSS35Q8N3Z0 413 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 C10orf53Q8N6V4 93 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 THRSPQ92748 146 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 WBP1Q96G27 269 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 C4orf45Q96LM5 186 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 KLHDC3Q9BQ90 382 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 NKX2-4Q9H2Z4 354 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 C8orf33Q9H7E9 229 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 UCK1Q9HA47 277 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 LANCL2Q9NS86 450 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 LAMP5Q9UJQ1 280 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 MAB21L2Q9Y586 359 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TP53BP1Q12888 1972 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TVP23AA6NH52 213 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ZSCAN5BA6NJL1 495 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 C17orf105B2RV13 164 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CHURC1-FNTBB4DL54 471 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TOXO94900 526 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 RENP00797 406 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ANXA7P20073 488 aaKnown RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 C4BPBP20851 252 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ITPKBP27987 946 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 KIR3DL2P43630 455 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CAPZBP47756 277 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 FASLGP48023 281 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 FNTBP49356 437 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 PLA2G7Q13093 441 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SHHQ15465 462 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 FAAP20Q6NZ36 180 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SIX5Q8N196 739 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 OR6N2Q8NGY6 317 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CEP76Q8TAP6 659 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 TAAR8Q969N4 342 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 MMABQ96EY8 250 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 CHRNA10Q9GZZ6 450 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 COMMD4Q9H0A8 199 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 NXF5Q9H1B4 397 aaKnown RBP12.37□□□□□ -0.43
BRCA1-209ENST00000470026 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 PLCL2Q9UPR0 1127 aa12.37□□□□□ -0.43
BRCA1-209ENST00000470026 REV3LO60673 3130 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 FRG2CA6NGY1 282 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 B8ZZF3 427 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 BGLAPP02818 100 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 HPGDP15428 266 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 CXCL2P19875 107 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 TACR3P29371 465 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 SLC6A8P48029 635 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 BLKP51451 505 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 MAZP56270 477 aaKnown RBP12.36□□□□□ -0.43
BRCA1-209ENST00000470026 DLX2Q07687 328 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-209ENST00000470026 AANATQ16613 207 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 NHLRC3Q5JS37 347 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 DPY19L4Q7Z388 723 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF321PQ8N8H1 164 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 OTOSQ8NHW6 89 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 PIGKQ92643 395 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 TMEM106AQ96A25 262 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 ADIPOR1Q96A54 375 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 INTS14Q96SY0 518 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 TAS2R8Q9NYW2 309 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 KCNN3Q9UGI6 736 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 KIF25Q9UIL4 384 aa12.36□□□□□ -0.43
BRCA1-209ENST00000470026 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 B4DGG1 531 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 H7C1C5 153 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 PRKNO60260 465 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-209ENST00000470026 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
BRCA1-209ENST00000470026 VSIG10L2P0DP72 767 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CD37P11049 281 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CSF2RBP32927 897 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms