RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 NPIPB4C9JG80 1138 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 SLC30A4O14863 429 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 SLC16A7O60669 478 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 CTLA4P16410 223 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 KLK2P20151 261 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 GABRA5P31644 462 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 CENPAP49450 140 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 P2RY4P51582 365 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 RRADP55042 308 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 ACTA2P62736 377 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 ACTG2P63267 376 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TUBA1BP68363 451 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 SLC35A1P78382 337 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 BDH1Q02338 343 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 FOXO1Q12778 655 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TMEM225Q6GV28 225 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TUBA1AQ71U36 451 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 SLC16A9Q7RTY1 509 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 WDFY1Q8IWB7 410 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 UEVLDQ8IX04 471 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TIGD4Q8IY51 512 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 FAM83FQ8NEG4 500 aaPredicted RBP16.24■□□□□ 0.19
SMC4-211ENST00000469858 OR2M7Q8NG81 312 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 SNX33Q8WV41 574 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 FOXN4Q96NZ1 517 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 FAM173AQ9BQD7 235 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TMED9Q9BVK6 235 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 CELSR3Q9NYQ7 3312 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 E9PI62 339 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 PMS2P2O95744 297 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 BIDP55957 195 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 B3GALT5-AS1P59052 145 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 RAC1P63000 192 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 AGAP7PQ5VUJ5 663 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 VASH1Q7L8A9 365 aaPredicted RBP16.24■□□□□ 0.19
SMC4-211ENST00000469858 OR6N2Q8NGY6 317 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 AGAP4Q96P64 663 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 EMC6Q9BV81 110 aa16.24■□□□□ 0.19
SMC4-211ENST00000469858 TSPAN10Q9H1Z9 355 aaPredicted RBP16.24■□□□□ 0.19
SMC4-211ENST00000469858 SIRT4Q9Y6E7 314 aaPredicted RBP16.24■□□□□ 0.19
SMC4-211ENST00000469858 ZNF670-ZNF695F2Z2N8 137 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 RAMP1O60894 148 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 HLA-DQA2P01906 255 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 WT1P19544 449 aaPredicted RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 ROR2Q01974 943 aaKnown RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 ETFDHQ16134 617 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 CRTC2Q53ET0 693 aaPredicted RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 WIPI1Q5MNZ9 446 aaPredicted RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 VASNQ6EMK4 673 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 C22orf42Q6IC83 251 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 CCDC86Q9H6F5 360 aaKnown RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 WDR76Q9H967 626 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 TXNL4BQ9NX01 149 aaKnown RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 CDV3Q9UKY7 258 aaKnown RBP16.23■□□□□ 0.19
SMC4-211ENST00000469858 PMF1-BGLAPU3KQ54 211 aa16.23■□□□□ 0.19
SMC4-211ENST00000469858 IGLV1-36A0A0B4J1U3 117 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 AQP7P3A6NL99 342 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 RFC3P40938 356 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 FABP5Q01469 135 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 RTP5Q14D33 572 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 CDONQ4KMG0 1287 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 FAM205BPQ63HN1 556 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 RPTNQ6XPR3 784 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 SULF2Q8IWU5 870 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 KLHL15Q96M94 604 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 SFXN2Q96NB2 322 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 INTS14Q96SY0 518 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 SLIRPQ9GZT3 109 aaKnown RBP16.22■□□□□ 0.19
SMC4-211ENST00000469858 GNG8Q9UK08 70 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 GRIP1Q9Y3R0 1128 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 GJE1A6NN92 205 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 PSMD9O00233 223 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 TNFSF11O14788 317 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 RPS27P42677 84 aaKnown RBP16.22■□□□□ 0.19
SMC4-211ENST00000469858 TAS2R43P59537 309 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 HSF2Q03933 536 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 FMODQ06828 376 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 OTPQ5XKR4 325 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 ARL9Q6T311 187 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.22■□□□□ 0.19
SMC4-211ENST00000469858 SYS1Q8N2H4 156 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 MRPL48Q96GC5 212 aaKnown RBP16.22■□□□□ 0.19
SMC4-211ENST00000469858 OXGR1Q96P68 337 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 KCNK17Q96T54 332 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 KLHDC2Q9Y2U9 406 aa16.22■□□□□ 0.19
SMC4-211ENST00000469858 PTPRZ1P23471 2315 aaPredicted RBP16.21■□□□□ 0.19
SMC4-211ENST00000469858 A0A0J9YW62 118 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 OR5H15A6NDH6 313 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 H0YC42 278 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 TRAF3IP2O43734 574 aaPredicted RBP16.21■□□□□ 0.19
SMC4-211ENST00000469858 CRABP1P29762 137 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 ZNF239Q16600 458 aaKnown RBP16.21■□□□□ 0.19
SMC4-211ENST00000469858 DPY19L4Q7Z388 723 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 CDC20BQ86Y33 519 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 KCNE4Q8WWG9 221 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 PELI1Q96FA3 418 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 ADAD1Q96M93 576 aaKnown RBP16.21■□□□□ 0.19
SMC4-211ENST00000469858 HDHD5Q9BXW7 423 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 OR2B2Q9GZK3 357 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms