RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 E9PLN8 166 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 J3QRK9 145 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MAGEB3O15480 346 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 AIREO43918 545 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 PTP4A3O75365 173 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TGM6O95932 706 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TIMP3P35625 211 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TGFBR2P37173 567 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 CA7P43166 264 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 P2RY4P51582 365 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 VBP1P61758 197 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 POU4F3Q15319 338 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TIMM50Q3ZCQ8 353 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 RTL6Q6ICC9 239 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 RPTNQ6XPR3 784 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 ZNF367Q7RTV3 350 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
DDX56-208ENST00000467318 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 VKORC1Q9BQB6 163 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 MROQ9BYG7 248 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 RNF122Q9H9V4 155 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 ZNF226Q9NYT6 803 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 FAM215AQ9Y5M1 114 aa13.15□□□□□ -0.3
DDX56-208ENST00000467318 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 A0A1W2PNV4 684 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 ZAR1LA6NP61 321 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 MS4A18H0YCH9 400 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 AQP8O94778 261 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 RCBTB2O95199 551 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 LCKP06239 509 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.31
DDX56-208ENST00000467318 AHCYP23526 432 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 CD40LGP29965 261 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 UQCRC1P31930 480 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 BCAP31P51572 246 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 SLC16A1P53985 500 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.31
DDX56-208ENST00000467318 IRF3Q14653 427 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 SLC17A1Q14916 467 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 MS4A18Q3C1V0 323 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 ABLIM2Q6H8Q1 611 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 MCEMP1Q8IX19 187 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 OR13C2Q8NGS9 318 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 NDNFQ8TB73 568 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 ZFP3Q96NJ6 502 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 DACH2Q96NX9 599 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 OXGR1Q96P68 337 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 TTYH2Q9BSA4 534 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 UCK2Q9BZX2 261 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 TAS2R5Q9NYW4 299 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 IL20Q9NYY1 176 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 OSGIN2Q9Y236 505 aa13.15□□□□□ -0.31
DDX56-208ENST00000467318 TRAV27A0A087WT01 109 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 GPR171O14626 319 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 RNF13O43567 381 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 IL2RAP01589 272 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 OSMP13725 252 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 ZNF43P17038 809 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 SNRPGP62308 76 aaKnown RBP13.14□□□□□ -0.31
DDX56-208ENST00000467318 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
DDX56-208ENST00000467318 FHL1Q13642 323 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
DDX56-208ENST00000467318 IGFBP7Q16270 282 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
DDX56-208ENST00000467318 ALG10Q5BKT4 473 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 MEDAGQ5VYS4 303 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 SMARCD3Q6STE5 483 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 PTCHD4Q6ZW05 846 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 ABHD3Q8WU67 409 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms