RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 C15orf56Q8N910 161 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 RLN3Q8WXF3 142 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 SYAP1Q96A49 352 aaPredicted RBP2.19□□□□□ -2.06
SMC4-207ENST00000467263 PDXPQ96GD0 296 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 WFIKKN1Q96NZ8 548 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 TSSK3Q96PN8 268 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 MTMR9Q96QG7 549 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 A0A1B0GVX0 72 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 C7orf66A4D0T2 115 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 ZNF705GA8MUZ8 300 aaPredicted RBP2.18□□□□□ -2.06
SMC4-207ENST00000467263 H0YHG0 523 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 ANGPT2O15123 496 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 NOL3O60936 208 aaKnown RBP2.18□□□□□ -2.06
SMC4-207ENST00000467263 UPK3AO75631 287 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 GDI1P31150 447 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 GRIA1P42261 906 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 CYB561P49447 251 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 CCR8P51685 355 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 CHRFAM7AQ494W8 412 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 KPRPQ5T749 579 aaPredicted RBP2.18□□□□□ -2.06
SMC4-207ENST00000467263 HES5Q5TA89 166 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 Q5W150 140 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 UQCC3Q6UW78 93 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 DHDDSQ86SQ9 333 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 ZSCAN30Q86W11 494 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 STPG2Q8N412 459 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 RBMXL1Q96E39 390 aaKnown RBP2.18□□□□□ -2.06
SMC4-207ENST00000467263 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 FAIM2Q9BWQ8 316 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 PARD6BQ9BYG5 372 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 WIF1Q9Y5W5 379 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 PLA2R1Q13018 1463 aa2.18□□□□□ -2.06
SMC4-207ENST00000467263 WDR62O43379 1518 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 TUBGCP6Q96RT7 1819 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 MGRN1O60291 552 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 SRP72O76094 671 aaKnown RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 CAPN1P07384 714 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 PSMC3P17980 439 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 CCT3P49368 545 aaKnown RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 IRX3P78415 501 aaPredicted RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 FGL1Q08830 312 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 DGUOKQ16854 277 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 XKR4Q5GH76 650 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 FBXW9Q5XUX1 488 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 ENPP6Q6UWR7 440 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 ZNF493Q6ZR52 646 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 UBALD2Q8IYN6 164 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 PUSL1Q8N0Z8 303 aaKnown RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 ARRDC1Q8N5I2 433 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 ZNF557Q8N988 423 aaPredicted RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 ZNF461Q8TAF7 563 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 SCFD1Q8WVM8 642 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 RMI2Q96E14 147 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 RPRD1AQ96P16 312 aaPredicted RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 OR8B4Q96RC9 309 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 SORT1Q99523 831 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 RARRES2Q99969 163 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 OSBPL10Q9BXB5 764 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 PPA2Q9H2U2 334 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 RPP21Q9H633 154 aaKnown RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 ZNF355PQ9NSJ1 428 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 CGNQ9P2M7 1197 aaKnown RBP2.17□□□□□ -2.06
SMC4-207ENST00000467263 KIAA1257Q9ULG3 409 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 ATP10AO60312 1499 aa2.17□□□□□ -2.06
SMC4-207ENST00000467263 OR7A10O76100 309 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 SYCNQ0VAF6 134 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 PON3Q15166 354 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 Q6ZPB1 254 aaPredicted RBP2.16□□□□□ -2.06
SMC4-207ENST00000467263 SHISA6Q6ZSJ9 500 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 BIVMQ86UB2 503 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 RIMKLAQ8IXN7 391 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 GMCL1P1Q8NEA9 526 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 OR10G4Q8NGN3 311 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 C10orf35Q96D05 121 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 OR10C1Q96KK4 312 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 COPS8Q99627 209 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 ERP44Q9BS26 406 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 LINC00597Q9H2U6 94 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 EPS15L1Q9UBC2 864 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 MARCOQ9UEW3 520 aaPredicted RBP2.16□□□□□ -2.06
SMC4-207ENST00000467263 GGA2Q9UJY4 613 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 CDH9Q9ULB4 789 aa2.16□□□□□ -2.06
SMC4-207ENST00000467263 TRAV26-1A0A087WT03 109 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 TRAV40A0A0B4J280 105 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 ZNF726A6NNF4 738 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 FCMRO60667 390 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 SNNO75324 88 aaPredicted RBP2.15□□□□□ -2.07
SMC4-207ENST00000467263 GABARAPO95166 117 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 VAMP5O95183 116 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 RCBTB2O95199 551 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 GUCA1CO95843 209 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 IGHV2-5P01817 119 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 DCNP07585 359 aaKnown RBP2.15□□□□□ -2.07
SMC4-207ENST00000467263 FOLR1P15328 257 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 TCN2P20062 427 aa2.15□□□□□ -2.07
SMC4-207ENST00000467263 AK4P27144 223 aaPredicted RBP2.15□□□□□ -2.07
SMC4-207ENST00000467263 ATP5C1P36542 298 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms