RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 KCTD19Q17RG1 926 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 C9orf135Q5VTT2 229 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 REEP3Q6NUK4 255 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 SLC16A14Q7RTX9 510 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 BIVMQ86UB2 503 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CMTM1Q8IZ96 169 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 LIX1Q8N485 282 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ZADH2Q8N4Q0 377 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ZFP41Q8N8Y5 198 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 NEIL3Q8TAT5 605 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 GPR151Q8TDV0 419 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CXorf40AQ8TE69 158 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CAPSLQ8WWF8 208 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ACOT11Q8WXI4 607 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 FGF14Q92915 247 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 UCN3Q969E3 161 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 KIAA1143Q96AT1 154 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ECHDC3Q96DC8 303 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 MTG1Q9BT17 334 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 UGT1A7Q9HAW7 530 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 UGT1A8Q9HAW9 530 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 KCNJ16Q9NPI9 418 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 TUBG2Q9NRH3 451 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 SAMSN1Q9NSI8 373 aaKnown RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 TBC1D24Q9ULP9 559 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF318Q5VUA4 2279 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 INSRP06213 1382 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 C12orf71A8MTZ7 269 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 H0YC42 278 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 EMC8O43402 210 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 TRAF3IP2O43734 574 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 MGRN1O60291 552 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 ACTL6AO96019 429 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 KRT6AP02538 564 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 SERPINA5P05154 406 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 ACSM4P0C7M7 580 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 STAG3L3P0CL85 134 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 ICAM2P13598 275 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF250P15622 560 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 BCKDHBP21953 392 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 RRM2P31350 389 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 GPR6P46095 362 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 OR1G1P47890 313 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 RFX3P48380 749 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 CSNK1EP49674 416 aaKnown RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 KRTAP10-6P60371 365 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 IL18Q14116 193 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 FZD2Q14332 565 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 TWF2Q6IBS0 349 aaKnown RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 C22orf42Q6IC83 251 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 LINC00173Q6ZV60 143 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 TMCO2Q7Z6W1 182 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-209ENST00000467124 DCAF4L2Q8NA75 395 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 FBXL13Q8NEE6 735 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 OR2L5Q8NG80 312 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 RHEBL1Q8TAI7 183 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 IL22RA2Q969J5 263 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 TMEM101Q96IK0 257 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 PKNOX2Q96KN3 472 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 B3GALT6Q96L58 329 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 NCOR1P1Q9H4R4 102 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 IL26Q9NPH9 171 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 CCL28Q9NRJ3 127 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 PSME2Q9UL46 239 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 N6AMT1Q9Y5N5 214 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 HEBP2Q9Y5Z4 205 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 CDH10Q9Y6N8 788 aa2.91□□□□□ -1.94
VPS13A-209ENST00000467124 USP47Q96K76 1375 aa2.9□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF816-ZNF321PA0A0X1KG74 233 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 A0A1B0GW55 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 GJE1A6NN92 205 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF726A6NNF4 738 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 CYSRT1A8MQ03 144 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 HIDE1A8MVS5 230 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 GOLGA8TH3BQL2 631 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 NPIPB7O75200 414 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 CLPXO76031 633 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 OR2F2O95006 317 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 HPNP05981 417 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 GKN3PP0CG01 181 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L2P0CJ85 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L3P0CJ86 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L4P0CJ87 422 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L5P0CJ88 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L6P0CJ89 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 DUX4L7P0CJ90 424 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 MGMTP16455 207 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 EIF2S2P20042 333 aaKnown RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 HTR1EP28566 365 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 PRDX3P30048 256 aaKnown RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 CCT6AP40227 531 aaKnown RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 RIPPLY3P57055 190 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF92Q03936 586 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ORC2Q13416 577 aaPredicted RBP2.9□□□□□ -1.95
VPS13A-209ENST00000467124 AQP6Q13520 282 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 ZBED5Q49AG3 693 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 EOGTQ5NDL2 527 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 FHL5Q5TD97 284 aa2.9□□□□□ -1.95
VPS13A-209ENST00000467124 TTC19Q6DKK2 380 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms