RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 TSPAN32Q96QS1 320 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 GPX7Q96SL4 187 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 NIPSNAP1Q9BPW8 284 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ULBP2Q9BZM5 246 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 NRIP3Q9NQ35 241 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ADAM18Q9Y3Q7 739 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 A6NIZ1 184 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CENPBD1B2RD01 187 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 H3BNX3 289 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 EPXP11678 715 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 ANXA8P13928 327 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CDH2P19022 906 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 SLC6A6P31641 620 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 RPS6KA3P51812 740 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CLRN1P58418 232 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 RAP1BP61224 184 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 RAP1AP62834 184 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 COX10Q12887 443 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 GABRA6Q16445 453 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 FAM205BPQ63HN1 556 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 OR7E24Q6IFN5 339 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 RPL13AP3Q6NVV1 102 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 C22orf34Q6ZV56 151 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 FAM122BQ7Z309 247 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 ARIH2OSQ8N7S6 290 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 C1orf162Q8NEQ5 155 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 NOXO1Q8NFA2 376 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF519Q8TB69 540 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 HDAC2Q92769 488 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 Q96M85 177 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 MUS81Q96NY9 551 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 MRPL13Q9BYD1 178 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 EGLN3Q9H6Z9 239 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 KCNN3Q9UGI6 736 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 IER3IP1Q9Y5U9 82 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 MAGED1Q9Y5V3 778 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CDH10Q9Y6N8 788 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.37
DNMT3A-208ENST00000466601 CASKO14936 926 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ARHGEF9O43307 516 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 PPP1R3DO95685 299 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 QDPRP09417 244 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 APEHP13798 732 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ARF1P84077 181 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 HIST3H3Q16695 136 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ZNF787Q6DD87 383 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 GPR139Q6DWJ6 353 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 CLDN22Q8N7P3 220 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 SYT14Q8NB59 555 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 OR52L1Q8NGH7 329 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 OR1K1Q8NGR3 316 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ZNF837Q96EG3 531 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 CENPNQ96H22 339 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ZNF570Q96NI8 536 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ERMAPQ96PL5 475 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 PKP2Q99959 881 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ALG12Q9BV10 488 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 SEMA6AQ9H2E6 1030 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 ZNF556Q9HAH1 456 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 S100A14Q9HCY8 104 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 IL20Q9NYY1 176 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 POFUT2Q9Y2G5 429 aa12.7□□□□□ -0.38
DNMT3A-208ENST00000466601 TEX13CA0A0J9YWL9 993 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 OR5H1A6NKK0 313 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 G3V2T6 193 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 XKRYO14609 159 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 IMPA2O14732 288 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 DHHO43323 396 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 TXNDC12O95881 172 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 THBDP07204 575 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 ZNF23P17027 643 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 SDHAP31040 664 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 SH3BGRP55822 239 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 MYBPC1Q00872 1141 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 CD47Q08722 323 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 KRR1Q13601 381 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 STK11Q15831 433 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 LRFN4Q6PJG9 635 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 KLHL17Q6TDP4 642 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 P2RY8Q86VZ1 359 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 ZDHHC13Q8IUH4 622 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 C17orf78Q8N4C9 275 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 ATG16L2Q8NAA4 619 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
DNMT3A-208ENST00000466601 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms