RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LIX1Q8N485 282 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCDC54Q8NEL0 328 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 ELMO1Q92556 727 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 SLC38A4Q969I6 547 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 SMIM10Q96HG1 83 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 TGS1Q96RS0 853 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 RARRES2Q99969 163 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 OSBPL10Q9BXB5 764 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 FAM192AQ9GZU8 254 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 INPP5EQ9NRR6 644 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 SLC25A37Q9NYZ2 338 aa2.94□□□□□ -1.94
CDC42BPA-211ENST00000466538 AKNAQ7Z591 1439 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 A0A075B6Q4 140 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 A0A0B4J2A0 478 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 TCP11X1B4DZS4 312 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 PANO1I0J062 215 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CLOCKO15516 846 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 FTH1P02794 183 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CSF3P09919 207 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 PABPC4LP0CB38 370 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF17P17021 662 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 RCC1P18754 421 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 HNRNPH3P31942 346 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 NAA10P41227 235 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SSR4P51571 173 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCR8P51685 355 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF92Q03936 586 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CUL2Q13617 745 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 VAX1Q5SQQ9 334 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 LRRC66Q68CR7 880 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SLC8B1Q6J4K2 584 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 LCN12Q6JVE5 192 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SASS6Q6UVJ0 657 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 MS4A15Q8N5U1 240 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SLC22A8Q8TCC7 542 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 ACMSDQ8TDX5 336 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SDR42E1Q8WUS8 393 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 MCUR1Q96AQ8 359 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SGK3Q96BR1 496 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCDC126Q96EE4 140 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 MED8Q96G25 268 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 AURKBQ96GD4 344 aaPredicted RBP2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 ATP5SQ99766 215 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 CLMPQ9H6B4 373 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF226Q9NYT6 803 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 SHPKQ9UHJ6 478 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 TP53TG5Q9Y2B4 290 aa2.93□□□□□ -1.94
CDC42BPA-211ENST00000466538 KIR2DL5BA0A0G2JN68 375 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 KIR2DL5BA0A0G2JPC4 375 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 A0A1B0GVI7 797 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 ZNF726A6NNF4 738 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 LAD1O00515 517 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 MOSP00540 346 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 FGGP02679 453 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 IGHV3-43DP0DP04 118 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCNHP51946 323 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 PRRX1P54821 245 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 C21orf59P57076 290 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 RGS8P57771 180 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 YWHAGP61981 247 aaKnown RBP eCLIP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 IRX3P78415 501 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CKAP4Q07065 602 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 SGCAQ16586 387 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 SPANXN2Q5MJ10 180 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 C19orf35Q6ZS72 473 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CENPQQ7L2Z9 268 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 NIPA1Q7RTP0 329 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 MKXQ8IYA7 352 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 KIR2DL5AQ8N109 375 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 FBXL13Q8NEE6 735 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 OR1S2Q8NGQ3 325 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 KIR2DL5BQ8NHK3 375 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 ACER1Q8TDN7 264 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CXorf40AQ8TE69 158 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 TSEN15Q8WW01 171 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 RDH5Q92781 318 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 TMEM54Q969K7 222 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 LINC00597Q9H2U6 94 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CWH43Q9H720 699 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CTPS2Q9NRF8 586 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 STOX2Q9P2F5 926 aaPredicted RBP2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 LTBP1Q14766 1721 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 CROCCQ5TZA2 2017 aa2.92□□□□□ -1.94
CDC42BPA-211ENST00000466538 IGKV1D-13A0A0B4J2D9 117 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 LRRIQ3A6PVS8 624 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 AIM2O14862 343 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 IGKV1-13P0DP09 117 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 MGMTP16455 207 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 MDKP21741 143 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 CCNCP24863 283 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 AK4P27144 223 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 RRM2P31350 389 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 SERPINB5P36952 375 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 NSG1P42857 185 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 NMUP48645 174 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 LHX2P50458 406 aa2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 FGF8P55075 233 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-211ENST00000466538 RPS21P63220 83 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms